Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- peroxisome 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020854.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 99.61 | 99.61 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 97.28 | 96.9 |
| CDY35231 | Canola | peroxisome | 42.41 | 87.9 |
| CDX94534 | Canola | peroxisome | 84.44 | 85.1 |
| CDY16690 | Canola | peroxisome | 84.05 | 84.71 |
| KRH02005 | Soybean | endoplasmic reticulum, nucleus | 70.43 | 71.83 |
| KRH36525 | Soybean | endoplasmic reticulum | 70.82 | 71.37 |
| Solyc04g014670.2.1 | Tomato | plastid | 70.04 | 71.15 |
| KRH11511 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 70.43 | 70.98 |
| PGSC0003DMT400034518 | Potato | peroxisome | 69.26 | 70.08 |
| Zm00001d019439_P001 | Maize | extracellular | 66.15 | 67.19 |
| EER98384 | Sorghum | peroxisome | 65.37 | 66.4 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 64.98 | 66.01 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 24.51 | 65.62 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 64.2 | 65.22 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 64.2 | 65.22 |
| EES19901 | Sorghum | peroxisome | 64.2 | 65.22 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 63.81 | 64.82 |
| Os09t0133200-01 | Rice | peroxisome | 62.26 | 63.24 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 50.97 | 59.28 |
| Zm00001d038897_P001 | Maize | peroxisome | 63.42 | 58.42 |
| KRH70902 | Soybean | cytosol | 22.96 | 53.64 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 47.86 | 48.62 |
| CDX70101 | Canola | peroxisome | 33.85 | 33.21 |
| CDX98899 | Canola | peroxisome | 32.3 | 31.68 |
| CDY04977 | Canola | peroxisome | 32.3 | 31.56 |
| CDY14094 | Canola | peroxisome | 31.52 | 30.8 |
| CDY40186 | Canola | cytosol | 24.51 | 30.43 |
| CDY09917 | Canola | cytosol | 30.74 | 30.15 |
| CDY06260 | Canola | plastid | 30.35 | 29.77 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 30.35 | 29.77 |
| CDY40183 | Canola | plastid | 30.35 | 29.77 |
| CDY40175 | Canola | plasma membrane | 30.35 | 29.77 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 30.35 | 29.77 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 12.06 | 29.52 |
| CDX83307 | Canola | peroxisome | 29.96 | 29.39 |
| CDY31774 | Canola | cytosol | 26.85 | 29.36 |
| CDY16437 | Canola | mitochondrion | 30.35 | 29.32 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 29.96 | 29.28 |
| CDX83306 | Canola | plastid | 29.57 | 29.01 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 29.57 | 29.01 |
| CDX95751 | Canola | peroxisome | 29.57 | 29.01 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 29.57 | 29.01 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 29.57 | 29.01 |
| CDY52942 | Canola | mitochondrion | 29.96 | 28.95 |
| CDY10276 | Canola | mitochondrion | 29.96 | 28.95 |
| CDY06706 | Canola | mitochondrion | 29.96 | 28.95 |
| CDY14610 | Canola | mitochondrion | 29.96 | 28.95 |
| CDX97895 | Canola | cytosol | 26.46 | 28.94 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 30.35 | 28.78 |
| CDY09823 | Canola | peroxisome | 30.35 | 28.78 |
| CDY09824 | Canola | mitochondrion | 30.35 | 28.78 |
| CDX97893 | Canola | mitochondrion | 30.35 | 28.78 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 29.18 | 28.63 |
| CDX97899 | Canola | peroxisome | 29.18 | 28.63 |
| CDY31773 | Canola | plastid | 29.18 | 28.63 |
| CDY45432 | Canola | cytosol | 29.18 | 28.63 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 29.18 | 28.63 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 28.79 | 28.24 |
| CDY35991 | Canola | plastid | 13.62 | 28.23 |
| CDY40165 | Canola | plastid | 28.4 | 27.86 |
| CDY40185 | Canola | plastid | 28.4 | 27.86 |
| CDX95750 | Canola | cytosol | 29.57 | 27.74 |
| CDY04975 | Canola | mitochondrion | 12.06 | 27.68 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 28.02 | 27.59 |
| CDY45438 | Canola | cytosol | 28.02 | 27.48 |
| CDY68057 | Canola | cytosol | 28.02 | 27.48 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 28.02 | 27.48 |
| CDY40171 | Canola | cytosol | 23.35 | 27.15 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 32.68 | 27.1 |
| CDY64214 | Canola | mitochondrion | 17.9 | 26.9 |
| CDX97897 | Canola | cytosol, extracellular | 24.12 | 26.84 |
| CDY31770 | Canola | plastid | 24.12 | 26.72 |
| CDY72061 | Canola | cytosol | 11.28 | 26.61 |
| CDY51372 | Canola | plastid | 28.79 | 26.52 |
| CDX95752 | Canola | cytosol | 23.74 | 25.63 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.79 | 25.61 |
| CDY45441 | Canola | cytosol | 22.18 | 25.45 |
| CDY45433 | Canola | cytosol | 24.12 | 25.31 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.46 | 23.69 |
| CDY43488 | Canola | cytosol | 26.46 | 23.53 |
| CDX73802 | Canola | peroxisome | 27.24 | 23.49 |
| CDY00799 | Canola | peroxisome | 26.85 | 23.15 |
| CDY40177 | Canola | cytosol | 24.51 | 22.74 |
| CDY08402 | Canola | cytosol | 25.68 | 22.45 |
| CDX97890 | Canola | cytosol | 28.4 | 21.53 |
| CDY05152 | Canola | cytosol | 19.84 | 21.34 |
| CDY65683 | Canola | cytosol, mitochondrion | 30.35 | 19.55 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.06 | 18.57 |
| VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 69.65 | 17.4 |
| CDY31767 | Canola | plastid | 31.91 | 14.56 |
| CDY50145 | Canola | plastid | 29.18 | 10.36 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078CHZ2 | EnsemblPlants:CDX76382 | ProteinID:CDX76382 | ProteinID:CDX76382.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00126772001 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43943 |
| PANTHER:PTHR43943:SF2 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI0004EDAD6E | SEG:seg |
Description
BnaA08g10180D
Coordinates
chrLK031807:-:822863..824572
Molecular Weight (calculated)
27480.3 Da
IEP (calculated)
9.109
GRAVY (calculated)
0.059
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKKKVVPK RLQGKVAIVT ASTQGIGFGI VERLGLEGAS VVVSSRKQKN VDEAVEKLKA QEIDAFGIVC HVSNAQHRQI LVQKTIQRYG KIDIVVCNAA
101: VNPSTDPILS TQESALDKLW EVNVKSSILL LQDIAPHLEK GSSVIFITSI AAFQPQVPTA MYGVTKTALL GLTKALAAEM GPDTRVNAVA PGVVPTHFAS
201: FITRNSEVRR ASEEKTLLNR LGTTDDMAAA TAFLASDDAD YITGETLVVA GGMPSRL
101: VNPSTDPILS TQESALDKLW EVNVKSSILL LQDIAPHLEK GSSVIFITSI AAFQPQVPTA MYGVTKTALL GLTKALAAEM GPDTRVNAVA PGVVPTHFAS
201: FITRNSEVRR ASEEKTLLNR LGTTDDMAAA TAFLASDDAD YITGETLVVA GGMPSRL
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.