CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018391.1-P	Field mustard	cytosol	95.02	80.15
CDY40175	Canola	plasma membrane	94.57	79.77
CDY31774	Canola	cytosol	79.19	74.47
CDX97895	Canola	cytosol	78.73	74.04
CDY31770	Canola	plastid	77.38	73.71
CDY64214	Canola	mitochondrion	53.39	69.01
CDY40179	Canola	cytosol, peroxisome, plastid	80.09	67.82
CDY45434	Canola	cytosol, nucleus, plastid	80.09	67.56
CDY45438	Canola	cytosol	79.64	67.18
CDY40183	Canola	plastid	79.64	67.18
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	79.19	66.54
CDY40165	Canola	plastid	77.83	65.65
CDY31772	Canola	cytosol, peroxisome, plastid	77.83	65.65
CDX97899	Canola	peroxisome	76.92	64.89
CDY45441	Canola	cytosol	65.16	64.29
CDY31768	Canola	cytosol, peroxisome, plastid	75.57	63.74
CDY31773	Canola	plastid	75.11	63.36
CDY40188	Canola	cytosol, peroxisome, plasma membrane	75.11	63.36
CDX83306	Canola	plastid	75.11	63.36
CDX95753	Canola	cytosol, peroxisome, plastid	75.11	63.36
CDY45432	Canola	cytosol	74.21	62.6
CDY40185	Canola	plastid	73.76	62.21
VIT_06s0004g05440.t01	Wine grape	cytosol	23.08	62.2
VIT_06s0004g05400.t01	Wine grape	cytosol	31.22	62.16
CDY40177	Canola	cytosol	77.38	61.73
CDX83307	Canola	peroxisome	72.85	61.45
CDX95751	Canola	peroxisome	72.85	61.45
Solyc03g096650.1.1	Tomato	cytosol	24.43	60.67
CDX97897	Canola	cytosol, extracellular	63.35	60.61
VIT_06s0004g05310.t01	Wine grape	cytosol	30.77	60.18
CDY40182	Canola	cytosol, peroxisome, plastid	70.14	59.16
CDY45435	Canola	cytosol, peroxisome, plastid	68.78	58.02
CDY40186	Canola	cytosol	53.85	57.49
CDY45433	Canola	cytosol	62.9	56.73
CDX86486	Canola	cytosol, peroxisome, plastid	66.97	56.49
CDX86485	Canola	cytosol, peroxisome, plastid	66.52	56.11
CDY72061	Canola	cytosol	27.15	55.05
CDY68057	Canola	cytosol	65.16	54.96
CDY14610	Canola	mitochondrion	66.06	54.89
CDY10276	Canola	mitochondrion	66.06	54.89
CDY06706	Canola	mitochondrion	66.06	54.89
CDY16437	Canola	mitochondrion	64.71	53.76
CDY52942	Canola	mitochondrion	64.71	53.76
CDX95752	Canola	cytosol	57.01	52.94
CDY09917	Canola	cytosol	62.44	52.67
CDY06260	Canola	plastid	61.54	51.91
KRH29740	Soybean	cytosol	22.62	51.02
CDX97893	Canola	mitochondrion	62.44	50.92
CDY31776	Canola	cytosol, peroxisome, plastid	62.44	50.92
CDY09823	Canola	peroxisome	62.44	50.92
CDY09824	Canola	mitochondrion	62.44	50.92
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	57.92	50.79
VIT_06s0004g05380.t01	Wine grape	plastid	61.09	50.0
KRH24731	Soybean	nucleus	58.37	48.31
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	58.82	48.15
CDY04977	Canola	peroxisome	57.01	47.91
CDX98899	Canola	peroxisome	56.56	47.71
CDX70101	Canola	peroxisome	56.11	47.33
KRH24733	Soybean	nucleus	56.56	47.17
CDY14094	Canola	peroxisome	56.11	47.15
VIT_06s0004g05330.t01	Wine grape	peroxisome	53.85	46.85
VIT_06s0004g05370.t01	Wine grape	peroxisome	53.39	46.83
CDX95750	Canola	cytosol	57.92	46.72
CDY51372	Canola	plastid	57.47	45.52
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	54.3	44.61
GSMUA_Achr5P04570_001	Banana	cytosol	24.43	42.52
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	45.7	42.08
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	46.15	41.46
CDX97890	Canola	cytosol	57.47	37.46
CDX98898	Canola	cytosol, peroxisome, plasma membrane	52.49	37.42
CDY65683	Canola	cytosol, mitochondrion	65.16	36.09
VIT_06s0004g05450.t01	Wine grape	plasma membrane	28.96	35.56
CDY35991	Canola	plastid	18.55	33.06
CDY04975	Canola	mitochondrion	14.48	28.57
CDY16436	Canola	endoplasmic reticulum, vacuole	13.12	27.62
CDY31767	Canola	plastid	69.23	27.18
CDX94534	Canola	peroxisome	29.41	25.49
CDY16690	Canola	peroxisome	28.96	25.1
CDY35231	Canola	peroxisome	13.12	23.39
CDX76382	Canola	cytosol, mitochondrion, peroxisome	27.15	23.35
CDY50145	Canola	plastid	76.47	23.34
CDY27447	Canola	cytosol, mitochondrion, peroxisome	27.15	23.26
CDY43488	Canola	cytosol	24.43	18.69
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	23.53	18.12
CDY27781	Canola	cytosol, peroxisome, plastid	23.53	17.99
CDY08402	Canola	cytosol	23.53	17.69
CDY05153	Canola	cytosol, nucleus, plastid	5.43	17.14
CDY00799	Canola	peroxisome	22.62	16.78
CDX73802	Canola	peroxisome	22.62	16.78
CDY05152	Canola	cytosol	16.74	15.48

Protein Annotations

EnsemblPlants:CDY40171	EnsemblPlantsGene:GSBRNA2T00069300001	Gene3D:3.40.50.720	GO:A0A078HR54	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY40171
ProteinID:CDY40171.1	SUPFAM:SSF51735	UniParc:UPI0004EEC1E4	UniProt:A0A078HR54	MapMan:50.1.1	:

Description

BnaC04g13990DBnaC04g13990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR54]

Coordinates

chrLK032465:+:95664..101112

Molecular Weight (calculated)

23769.6 Da

IEP (calculated)

8.220

GRAVY (calculated)

0.034

Length

221 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHSIVEELA GFGARIHVCD ISEILLNQSL NEWGKKGFQV SGSICDVSSR PAREKLMQTV SMMFDGKLNI LVNNVGGLRT
101: KPTTEYLADD FSFHISTNLE SAYHLSQLSH PLLKASGFGS IVFISSVAGV VSMEGGSIYC LTKGTINQLA RNLACEWARD DIRANAVAPN FIQTAMAQPL
201: LGNARYKKSL TVNGLSCPQQ A

Best Arabidopsis Sequence Match ( AT2G29300.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.