Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- peroxisome 2
- plastid 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 91.73 | 92.46 |
VIT_06s0004g05310.t01 | Wine grape | cytosol | 38.98 | 87.61 |
VIT_06s0004g05380.t01 | Wine grape | plastid | 92.91 | 87.41 |
VIT_06s0004g05400.t01 | Wine grape | cytosol | 37.8 | 86.49 |
VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 87.8 | 82.59 |
VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 55.91 | 78.89 |
VIT_06s0004g05440.t01 | Wine grape | cytosol | 24.41 | 75.61 |
VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 72.05 | 74.39 |
VIT_06s0004g05370.t01 | Wine grape | peroxisome | 72.05 | 72.62 |
VIT_06s0004g05280.t01 | Wine grape | cytosol, nucleus, peroxisome | 66.54 | 67.06 |
VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 61.81 | 65.42 |
VIT_08s0007g00890.t01 | Wine grape | peroxisome | 61.81 | 62.8 |
Bra018402.1-P | Field mustard | cytosol | 53.54 | 62.1 |
VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 65.35 | 61.94 |
CDY45441 | Canola | cytosol | 53.94 | 61.16 |
Bra018404.1-P | Field mustard | cytosol | 44.49 | 60.75 |
AT2G29360.1 | Thale cress | cytosol | 64.17 | 60.15 |
CDX86486 | Canola | cytosol, peroxisome, plastid | 61.81 | 59.92 |
Bra030683.1-P | Field mustard | cytosol, mitochondrion, plastid | 61.42 | 59.54 |
CDY68057 | Canola | cytosol | 61.02 | 59.16 |
VIT_08s0007g00900.t01 | Wine grape | mitochondrion, plastid | 61.02 | 59.16 |
Bra039977.1-P | Field mustard | plastid | 44.88 | 59.07 |
CDY52942 | Canola | mitochondrion | 61.81 | 59.02 |
AT1G07440.1 | Thale cress | mitochondrion | 61.42 | 58.65 |
AT2G29370.1 | Thale cress | peroxisome | 61.81 | 58.58 |
AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 59.84 | 58.46 |
Solyc03g096650.1.1 | Tomato | cytosol | 20.47 | 58.43 |
AT2G29290.2 | Thale cress | plastid | 60.24 | 58.4 |
CDX86485 | Canola | cytosol, peroxisome, plastid | 60.24 | 58.4 |
CDY09917 | Canola | cytosol | 60.24 | 58.4 |
AT2G29350.1 | Thale cress | plastid | 61.81 | 58.36 |
Bra039755.1-P | Field mustard | mitochondrion | 61.02 | 58.27 |
CDY16437 | Canola | mitochondrion | 61.02 | 58.27 |
AT2G29150.1 | Thale cress | peroxisome | 61.42 | 58.21 |
VIT_13s0019g02130.t01 | Wine grape | peroxisome | 61.42 | 58.21 |
AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 59.84 | 58.02 |
Bra018391.1-P | Field mustard | cytosol | 59.84 | 58.02 |
Bra015580.1-P | Field mustard | mitochondrion | 60.63 | 57.89 |
CDY06706 | Canola | mitochondrion | 60.63 | 57.89 |
Bra039969.1-P | Field mustard | cytosol | 59.84 | 57.79 |
CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 59.84 | 57.79 |
KRH24731 | Soybean | nucleus | 60.63 | 57.68 |
Bra018393.1-P | Field mustard | cytosol | 59.45 | 57.63 |
Bra031575.1-P | Field mustard | plastid | 59.45 | 57.63 |
CDY40175 | Canola | plasma membrane | 59.45 | 57.63 |
CDY45434 | Canola | cytosol, nucleus, plastid | 59.45 | 57.63 |
Bra039974.1-P | Field mustard | cytosol, plasma membrane, plastid | 59.45 | 57.41 |
Bra018400.1-P | Field mustard | cytosol, nucleus, plastid | 59.06 | 57.25 |
CDY06260 | Canola | plastid | 59.06 | 57.25 |
CDY40183 | Canola | plastid | 59.06 | 57.25 |
VIT_13s0019g02140.t01 | Wine grape | peroxisome | 61.02 | 57.2 |
CDY10276 | Canola | mitochondrion | 59.84 | 57.14 |
CDY14610 | Canola | mitochondrion | 59.84 | 57.14 |
CDY31774 | Canola | cytosol | 52.76 | 57.02 |
CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 58.66 | 56.87 |
CDY40179 | Canola | cytosol, peroxisome, plastid | 58.27 | 56.7 |
CDX97895 | Canola | cytosol | 52.36 | 56.6 |
AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 57.87 | 56.54 |
Bra018401.1-P | Field mustard | cytosol | 56.3 | 56.52 |
Bra018396.1-P | Field mustard | cytosol | 58.27 | 56.49 |
CDY45432 | Canola | cytosol | 58.27 | 56.49 |
CDY45438 | Canola | cytosol | 58.27 | 56.49 |
CDX97893 | Canola | mitochondrion | 60.24 | 56.46 |
CDY09823 | Canola | peroxisome | 60.24 | 56.46 |
CDY09824 | Canola | mitochondrion | 60.24 | 56.46 |
Bra039971.1-P | Field mustard | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 57.87 | 56.11 |
CDX97899 | Canola | peroxisome | 57.87 | 56.11 |
CDY31772 | Canola | cytosol, peroxisome, plastid | 57.87 | 56.11 |
CDY40165 | Canola | plastid | 57.87 | 56.11 |
Bra039976.1-P | Field mustard | cytosol | 59.84 | 56.09 |
CDY31776 | Canola | cytosol, peroxisome, plastid | 59.84 | 56.09 |
AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 57.48 | 55.73 |
Bra018405.1-P | Field mustard | cytosol | 57.48 | 55.73 |
VIT_08s0007g00920.t01 | Wine grape | peroxisome | 58.27 | 55.43 |
AT2G29320.1 | Thale cress | mitochondrion | 58.66 | 55.39 |
Bra000477.1-P | Field mustard | plastid | 57.09 | 55.34 |
Bra039514.1-P | Field mustard | cytosol, peroxisome, plastid | 57.09 | 55.34 |
Bra039973.1-P | Field mustard | plastid | 57.09 | 55.34 |
CDX83306 | Canola | plastid | 57.09 | 55.34 |
CDX95753 | Canola | cytosol, peroxisome, plastid | 57.09 | 55.34 |
CDY16436 | Canola | endoplasmic reticulum, vacuole | 22.83 | 55.24 |
CDX95750 | Canola | cytosol | 59.45 | 55.11 |
KRH24733 | Soybean | nucleus | 57.48 | 55.09 |
CDY40186 | Canola | cytosol | 44.88 | 55.07 |
CDY64214 | Canola | mitochondrion | 37.01 | 54.97 |
Bra000476.1-P | Field mustard | cytosol, peroxisome, plastid | 56.69 | 54.96 |
CDX95751 | Canola | peroxisome | 56.69 | 54.96 |
CDY31768 | Canola | cytosol, peroxisome, plastid | 56.69 | 54.96 |
CDY40185 | Canola | plastid | 56.69 | 54.96 |
Bra027962.1-P | Field mustard | cytosol | 37.4 | 54.91 |
Bra039513.1-P | Field mustard | peroxisome | 56.3 | 54.58 |
Bra039967.1-P | Field mustard | plastid | 56.3 | 54.58 |
CDY31773 | Canola | plastid | 56.3 | 54.58 |
CDX83307 | Canola | peroxisome | 55.91 | 54.2 |
KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 57.09 | 53.9 |
CDY40171 | Canola | cytosol | 46.85 | 53.85 |
Bra039966.1-P | Field mustard | cytosol | 61.02 | 53.82 |
CDY51372 | Canola | plastid | 59.06 | 53.76 |
CDY45433 | Canola | cytosol | 51.18 | 53.06 |
CDY31770 | Canola | plastid | 48.43 | 53.02 |
CDY45435 | Canola | cytosol, peroxisome, plastid | 54.33 | 52.67 |
Bra018399.1-P | Field mustard | cytosol, peroxisome, plastid | 53.94 | 52.29 |
CDY40182 | Canola | cytosol, peroxisome, plastid | 53.94 | 52.29 |
CDX97897 | Canola | cytosol, extracellular | 46.85 | 51.52 |
AT2G29300.2 | Thale cress | extracellular | 55.91 | 49.65 |
AT2G29170.1 | Thale cress | cytosol | 20.87 | 49.53 |
VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 55.12 | 49.12 |
KRH29740 | Soybean | cytosol | 18.9 | 48.98 |
CDY72061 | Canola | cytosol | 20.87 | 48.62 |
AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 57.48 | 47.56 |
CDY40177 | Canola | cytosol | 50.79 | 46.57 |
Bra027961.1-P | Field mustard | cytosol | 54.72 | 45.87 |
CDX95752 | Canola | cytosol | 42.91 | 45.8 |
CDX97890 | Canola | cytosol | 58.27 | 43.66 |
GSMUA_Achr5P04570_001 | Banana | cytosol | 20.47 | 40.94 |
CDY65683 | Canola | cytosol, mitochondrion | 60.24 | 38.35 |
CDY31767 | Canola | plastid | 62.6 | 28.24 |
VIT_19s0085g00500.t01 | Wine grape | peroxisome | 26.38 | 22.56 |
VIT_01s0011g01520.t01 | Wine grape | peroxisome | 24.8 | 21.21 |
VIT_17s0000g08740.t01 | Wine grape | cytosol | 10.24 | 21.14 |
CDY50145 | Canola | plastid | 57.09 | 20.03 |
VIT_14s0128g00340.t01 | Wine grape | plastid | 26.77 | 19.94 |
VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 28.35 | 7.0 |
Protein Annotations
Gene3D:3.40.50.720 | MapMan:50.1.1 | ProteinID:CCB43542 | ProteinID:CCB43542.1 | UniProt:F6GUY3 | EMBL:FN594951 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 |
PANTHER:PTHR42898:SF7 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00021091CD | ArrayExpress:VIT_06s0004g05330 |
EnsemblPlantsGene:VIT_06s0004g05330 | EnsemblPlants:VIT_06s0004g05330.t01 | RefSeq:XP_002282554 | RefSeq:XP_002282554.1 | RefSeq:XP_003632145 | RefSeq:XP_003632145.1 |
Description
No Description!
Coordinates
chr6:+:6205940..6208219
Molecular Weight (calculated)
27673.4 Da
IEP (calculated)
7.005
GRAVY (calculated)
0.167
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIRISITI FHSFTHAIVE ELAGLGATIH TCSRKETELN ECLKDWKAKG FGVSGSVCDV SSRAQREKLM ETVSSVFKGK LNILVNNAAI VIQKPTVEVT
101: AEEFSTIMAI NFESVYHLSQ LAHPLLKASG AGSIVFISSV AGVVSIKYLS AYSVTKGAMN QLTKNLACEW AEDNIRSNAV APWYIKTPMV DQMFSNKTFL
201: EEVINRAPLR RVGDPKEVSS LVAFLCLPAS SYITGQTICV DGGVTVNGFE PNLF
101: AEEFSTIMAI NFESVYHLSQ LAHPLLKASG AGSIVFISSV AGVVSIKYLS AYSVTKGAMN QLTKNLACEW AEDNIRSNAV APWYIKTPMV DQMFSNKTFL
201: EEVINRAPLR RVGDPKEVSS LVAFLCLPAS SYITGQTICV DGGVTVNGFE PNLF
001: MVLDMASHLY TNPPQNLHFI SSSSSLKPHL CLSFKRINPK HKSSSSSVFV PYASQSSIAI TSKERWSLNG MSALVTGGTR GIGRAIVEEL AGLGAEVHTC
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
101: ARNEYELENC LSDWNRSGFR VAGSVCDVSD RSQREALMET VSSVFEGKLH ILVNNVGTNI RKPMVEFTAG EFSTLMSTNF ESVFHLCQLA YPLLRESKAG
201: SVVFISSVSG FVSLKNMSVQ SSTKGAINQL TRSLACEWAK DNIRINAVAP WYIKTSMVEQ VLSNKEYLEE VYSVTPLGRL GEPREVSSAV AFLCLPASSY
301: ITGQILCVDG GMSINGFFPR HD
Arabidopsis Description
Tropinone reductase homolog At2g29260, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW12]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.