CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039973.1-P	Field mustard	plastid	98.09	98.09
CDX97897	Canola	cytosol, extracellular	85.5	96.97
CDY31768	Canola	cytosol, peroxisome, plastid	89.31	89.31
CDY31772	Canola	cytosol, peroxisome, plastid	89.31	89.31
CDX97899	Canola	peroxisome	86.64	86.64
CDX83307	Canola	peroxisome	85.11	85.11
CDY45432	Canola	cytosol	84.73	84.73
CDY40188	Canola	cytosol, peroxisome, plasma membrane	84.73	84.73
CDX95751	Canola	peroxisome	84.35	84.35
CDY40186	Canola	cytosol	66.03	83.57
CDY40182	Canola	cytosol, peroxisome, plastid	82.82	82.82
CDX83306	Canola	plastid	82.44	82.44
CDX95753	Canola	cytosol, peroxisome, plastid	82.06	82.06
CDY45435	Canola	cytosol, peroxisome, plastid	81.68	81.68
CDY40185	Canola	plastid	80.92	80.92
CDY40175	Canola	plasma membrane	78.63	78.63
CDY45433	Canola	cytosol	72.52	77.55
CDY45434	Canola	cytosol, nucleus, plastid	77.48	77.48
CDY45438	Canola	cytosol	77.1	77.1
CDY31774	Canola	cytosol	69.08	77.02
CDX97895	Canola	cytosol	69.08	77.02
CDY40179	Canola	cytosol, peroxisome, plastid	76.72	77.01
CDY40183	Canola	plastid	76.72	76.72
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	76.72	76.43
CDY40165	Canola	plastid	76.34	76.34
CDY45441	Canola	cytosol	64.89	75.89
CDY40171	Canola	cytosol	63.36	75.11
CDX86486	Canola	cytosol, peroxisome, plastid	72.52	72.52
CDY31770	Canola	plastid	63.74	71.98
CDX95752	Canola	cytosol	64.89	71.43
CDY68057	Canola	cytosol	70.99	70.99
CDY09917	Canola	cytosol	70.61	70.61
CDY06260	Canola	plastid	69.08	69.08
CDX86485	Canola	cytosol, peroxisome, plastid	68.7	68.7
CDY14610	Canola	mitochondrion	67.18	66.17
CDY10276	Canola	mitochondrion	67.18	66.17
CDY06706	Canola	mitochondrion	67.18	66.17
CDY52942	Canola	mitochondrion	66.41	65.41
Solyc03g096650.1.1	Tomato	cytosol	22.14	65.17
CDY40177	Canola	cytosol	68.7	64.98
CDY16437	Canola	mitochondrion	65.27	64.29
CDY64214	Canola	mitochondrion	40.84	62.57
CDX98899	Canola	peroxisome	62.21	62.21
CDY04977	Canola	peroxisome	61.83	61.6
CDX70101	Canola	peroxisome	61.45	61.45
CDY14094	Canola	peroxisome	61.07	60.84
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	58.4	60.71
KRH24733	Soybean	nucleus	61.07	60.38
VIT_06s0004g05370.t01	Wine grape	peroxisome	57.25	59.52
KRH24731	Soybean	nucleus	60.31	59.18
CDY31776	Canola	cytosol, peroxisome, plastid	61.07	59.04
CDY04975	Canola	mitochondrion	25.19	58.93
VIT_06s0004g05380.t01	Wine grape	plastid	60.31	58.52
CDX97893	Canola	mitochondrion	60.31	58.3
CDY09824	Canola	mitochondrion	60.31	58.3
CDY09823	Canola	peroxisome	60.31	58.3
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	59.54	57.78
VIT_06s0004g05400.t01	Wine grape	cytosol	24.43	57.66
CDY16436	Canola	endoplasmic reticulum, vacuole	22.9	57.14
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	58.02	56.51
VIT_06s0004g05330.t01	Wine grape	peroxisome	54.58	56.3
VIT_06s0004g05440.t01	Wine grape	cytosol	17.56	56.1
VIT_06s0004g05310.t01	Wine grape	cytosol	24.05	55.75
CDY51372	Canola	plastid	58.78	55.2
CDX95750	Canola	cytosol	57.63	55.11
CDY72061	Canola	cytosol	22.9	55.05
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	50.0	54.58
CDY35991	Canola	plastid	25.19	53.23
KRH29740	Soybean	cytosol	19.85	53.06
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	47.71	50.81
VIT_06s0004g05450.t01	Wine grape	plasma membrane	33.59	48.89
CDX98898	Canola	cytosol, peroxisome, plasma membrane	57.63	48.71
GSMUA_Achr5P04570_001	Banana	cytosol	22.9	47.24
CDX97890	Canola	cytosol	59.16	45.72
CDY65683	Canola	cytosol, mitochondrion	66.03	43.36
CDY35231	Canola	peroxisome	16.79	35.48
CDY31767	Canola	plastid	74.43	34.64
CDY50145	Canola	plastid	90.08	32.6
CDY16690	Canola	peroxisome	29.77	30.59
CDX94534	Canola	peroxisome	29.39	30.2
CDX76382	Canola	cytosol, mitochondrion, peroxisome	28.63	29.18
CDY27447	Canola	cytosol, mitochondrion, peroxisome	28.63	29.07
CDY43488	Canola	cytosol	28.63	25.95
CDY27781	Canola	cytosol, peroxisome, plastid	27.86	25.26
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	27.48	25.09
CDY05152	Canola	cytosol	21.37	23.43
CDY08402	Canola	cytosol	24.05	21.43
CDY00799	Canola	peroxisome	23.66	20.81
CDX73802	Canola	peroxisome	23.66	20.81
CDY05153	Canola	cytosol, nucleus, plastid	4.58	17.14

Protein Annotations

EnsemblPlants:CDY31773	EnsemblPlantsGene:GSBRNA2T00050429001	Gene3D:3.40.50.720	GO:A0A078H4K8	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY31773
ProteinID:CDY31773.1	SUPFAM:SSF51735	UniParc:UPI0004EF17E8	UniProt:A0A078H4K8	MapMan:50.1.1	:

Description

BnaA04g17090DBnaA04g17090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H4K8]

Coordinates

chrLK032278:+:438785..439950

Molecular Weight (calculated)

27908.3 Da

IEP (calculated)

6.500

GRAVY (calculated)

0.097

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGAAG IGYAIVEELA SFGAKVHVCD ISETLLSQSL SEWEKKGFKV SGSVCDVTSR PERETLIQKV SSLFDGKLNI LVNNVGVLRG
101: KPTTEYGADD FAFHISTNLE SAYHFCQLSH PLLKASGYGS IVFMSSVSGA VSINGASIYS LTKGALNQLA RNLACEWAKD GIRANAVAPN IIKTPQAQPY
201: LEDVSFREGL FGRTPLGRAG EPNEVAALVV FLCLPAASYI TGQTICADGG LTVNCFSYQP QA

Best Arabidopsis Sequence Match ( AT2G29310.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.