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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plastid
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018399.1-P Field mustard cytosol, peroxisome, plastid 99.24 99.24
CDY40182 Canola cytosol, peroxisome, plastid 96.95 96.95
CDX83307 Canola peroxisome 82.82 82.82
CDY45432 Canola cytosol 82.82 82.82
CDX95751 Canola peroxisome 82.82 82.82
CDY40186 Canola cytosol 65.27 82.61
CDX83306 Canola plastid 82.44 82.44
CDY40188 Canola cytosol, peroxisome, plasma membrane 82.06 82.06
CDY31773 Canola plastid 81.68 81.68
CDX95753 Canola cytosol, peroxisome, plastid 81.3 81.3
CDY31772 Canola cytosol, peroxisome, plastid 80.53 80.53
CDY31768 Canola cytosol, peroxisome, plastid 80.53 80.53
CDX97897 Canola cytosol, extracellular 70.61 80.09
CDX97899 Canola peroxisome 79.01 79.01
CDY40185 Canola plastid 78.24 78.24
CDY45434 Canola cytosol, nucleus, plastid 74.81 74.81
CDY40183 Canola plastid 74.43 74.43
CDY45433 Canola cytosol 68.7 73.47
CDY40175 Canola plasma membrane 73.28 73.28
CDY45438 Canola cytosol 72.52 72.52
CDY40165 Canola plastid 72.14 72.14
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 71.76 71.48
CDY40179 Canola cytosol, peroxisome, plastid 70.99 71.26
CDX97895 Canola cytosol 63.74 71.06
CDY31774 Canola cytosol 63.74 71.06
CDY45441 Canola cytosol 59.92 70.09
CDY40171 Canola cytosol 58.02 68.78
CDX95752 Canola cytosol 62.21 68.49
CDX86486 Canola cytosol, peroxisome, plastid 68.32 68.32
CDY09917 Canola cytosol 67.94 67.94
CDY06260 Canola plastid 66.79 66.79
CDY14610 Canola mitochondrion 67.18 66.17
CDY10276 Canola mitochondrion 67.18 66.17
CDY06706 Canola mitochondrion 67.18 66.17
CDY68057 Canola cytosol 66.03 66.03
CDY31770 Canola plastid 58.02 65.52
CDY16437 Canola mitochondrion 65.65 64.66
CDX86485 Canola cytosol, peroxisome, plastid 64.5 64.5
CDY16436 Canola endoplasmic reticulum, vacuole 25.57 63.81
CDY52942 Canola mitochondrion 64.5 63.53
KRH24731 Soybean nucleus 62.6 61.42
CDY04975 Canola mitochondrion 25.95 60.71
Solyc03g096650.1.1 Tomato cytosol 20.61 60.67
KRH24733 Soybean nucleus 61.07 60.38
CDY04977 Canola peroxisome 60.31 60.08
CDY40177 Canola cytosol 63.36 59.93
CDX98899 Canola peroxisome 59.92 59.92
CDY14094 Canola peroxisome 59.54 59.32
CDX70101 Canola peroxisome 59.16 59.16
CDY64214 Canola mitochondrion 38.55 59.06
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 60.31 58.74
VIT_06s0004g05370.t01 Wine grape peroxisome 56.11 58.33
CDY31776 Canola cytosol, peroxisome, plastid 59.54 57.56
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 55.34 57.54
CDX97893 Canola mitochondrion 58.78 56.83
CDY09824 Canola mitochondrion 58.78 56.83
CDY09823 Canola peroxisome 58.78 56.83
VIT_06s0004g05380.t01 Wine grape plastid 58.02 56.3
VIT_06s0004g05400.t01 Wine grape cytosol 23.66 55.86
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 57.25 55.56
CDX95750 Canola cytosol 58.02 55.47
VIT_06s0004g05440.t01 Wine grape cytosol 17.18 54.88
VIT_06s0004g05310.t01 Wine grape cytosol 23.66 54.87
VIT_06s0004g05330.t01 Wine grape peroxisome 52.67 54.33
CDY51372 Canola plastid 57.63 54.12
KRH29740 Soybean cytosol 19.85 53.06
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 48.47 52.92
CDY72061 Canola cytosol 21.37 51.38
CDY35991 Canola plastid 24.05 50.81
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 45.8 48.78
CDX98898 Canola cytosol, peroxisome, plasma membrane 54.58 46.13
VIT_06s0004g05450.t01 Wine grape plasma membrane 31.68 46.11
GSMUA_Achr5P04570_001 Banana cytosol 21.76 44.88
CDX97890 Canola cytosol 58.02 44.84
CDY65683 Canola cytosol, mitochondrion 66.79 43.86
CDY35231 Canola peroxisome 17.18 36.29
CDY31767 Canola plastid 70.61 32.86
CDY16690 Canola peroxisome 29.39 30.2
CDX94534 Canola peroxisome 29.39 30.2
CDX76382 Canola cytosol, mitochondrion, peroxisome 29.01 29.57
CDY27447 Canola cytosol, mitochondrion, peroxisome 29.01 29.46
CDY50145 Canola plastid 80.92 29.28
CDY43488 Canola cytosol 28.63 25.95
CDY17559 Canola cytoskeleton, nucleus, peroxisome 27.48 25.09
CDY27781 Canola cytosol, peroxisome, plastid 27.48 24.91
CDY05152 Canola cytosol 21.37 23.43
CDX73802 Canola peroxisome 25.95 22.82
CDY00799 Canola peroxisome 25.95 22.82
CDY08402 Canola cytosol 25.57 22.79
CDY05153 Canola cytosol, nucleus, plastid 4.58 17.14
Protein Annotations
EnsemblPlants:CDY45435EnsemblPlantsGene:GSBRNA2T00082048001Gene3D:3.40.50.720GO:A0A078I3K6InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR42898PANTHER:PTHR42898:SF7PFAM:PF13561PRINTS:PR00080PRINTS:PR00081ProteinID:CDY45435
ProteinID:CDY45435.1SUPFAM:SSF51735UniParc:UPI0004EF337AUniProt:A0A078I3K6MapMan:50.1.1:
Description
BnaA05g12660DBnaA05g12660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3K6]
Coordinates
chrLK032625:+:27534..32623
Molecular Weight (calculated)
28333.9 Da
IEP (calculated)
6.015
GRAVY (calculated)
0.098
Length
262 amino acids
Sequence
(BLAST)
001: MDKRWSLQGM TALVNGGASG IGYAIVEELA RFGAKIHVCD ISEVILNQSL SEWENKGFHV SGSVCDVTSL SERESLIQSV SSLFDGKLNI LVNNVGVLRG
101: KRTLEYAKED FDFHISTNLE PAFNFCQLSH PLLKASGYGS IIFMSSITGI LSFTAGSIYN LTKGALNQLA RNLACEWAKD GIRANAVAPN VIKTPLSQSY
201: LDDVKFNEEL CRRTPLGRAG ELNEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP HA
Best Arabidopsis Sequence Match ( AT2G29300.1 )
(BLAST)
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.