Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G06060.1 | CDY40183 | AT2G29330.1 | 21798944 |
| AT5G06060.1 | CDY45434 | AT2G29330.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04977 | Canola | peroxisome | 96.96 | 96.96 |
| AT5G06060.1 | Thale cress | peroxisome | 90.87 | 90.53 |
| CDY04975 | Canola | mitochondrion | 38.02 | 89.29 |
| CDX98899 | Canola | peroxisome | 88.21 | 88.55 |
| CDX70101 | Canola | peroxisome | 83.65 | 83.97 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 71.48 | 70.15 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 70.34 | 68.77 |
| VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 69.96 | 68.66 |
| HORVU4Hr1G060350.3 | Barley | plastid | 69.96 | 67.65 |
| GSMUA_Achr10P... | Banana | cytosol | 69.58 | 67.53 |
| TraesCS4A01G094400.1 | Wheat | plastid | 69.2 | 66.91 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 68.82 | 66.79 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 78.71 | 66.77 |
| TraesCS4B01G210000.1 | Wheat | plastid | 68.82 | 66.54 |
| TraesCS4D01G210800.1 | Wheat | plastid | 68.82 | 66.54 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 68.06 | 66.3 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 65.02 | 65.27 |
| CDY68057 | Canola | cytosol | 65.02 | 65.27 |
| CDY09917 | Canola | cytosol | 64.64 | 64.89 |
| KRH31007 | Soybean | mitochondrion | 66.54 | 64.58 |
| Os03t0268900-02 | Rice | plastid | 66.16 | 64.44 |
| Zm00001d028575_P001 | Maize | extracellular | 66.54 | 64.1 |
| CDY06260 | Canola | plastid | 63.5 | 63.74 |
| Os03t0269000-01 | Rice | plastid | 51.33 | 63.38 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 63.12 | 63.36 |
| KRG97856 | Soybean | mitochondrion, plastid | 65.4 | 63.24 |
| KRH31025 | Soybean | plastid | 66.54 | 63.18 |
| CDY06706 | Canola | mitochondrion | 63.88 | 63.16 |
| KRH31026 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 65.02 | 62.87 |
| CDY10276 | Canola | mitochondrion | 63.5 | 62.78 |
| CDY14610 | Canola | mitochondrion | 63.5 | 62.78 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 62.36 | 62.6 |
| CDY40183 | Canola | plastid | 62.36 | 62.6 |
| PGSC0003DMT400043152 | Potato | peroxisome | 65.78 | 62.45 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 61.98 | 62.21 |
| CDY52942 | Canola | mitochondrion | 62.74 | 62.03 |
| VIT_13s0019g02130.t01 | Wine grape | peroxisome | 63.12 | 61.94 |
| CDX83306 | Canola | plastid | 61.6 | 61.83 |
| CDX83307 | Canola | peroxisome | 61.6 | 61.83 |
| Solyc03g096660.1.1 | Tomato | extracellular | 45.63 | 61.54 |
| CDX95751 | Canola | peroxisome | 61.22 | 61.45 |
| CDY64214 | Canola | mitochondrion | 39.92 | 61.4 |
| CDX97893 | Canola | mitochondrion | 63.12 | 61.25 |
| CDY09824 | Canola | mitochondrion | 63.12 | 61.25 |
| VIT_13s0019g02140.t01 | Wine grape | peroxisome | 63.12 | 61.25 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 60.84 | 61.07 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 60.84 | 61.07 |
| CDY31773 | Canola | plastid | 60.84 | 61.07 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 60.84 | 61.07 |
| CDY40186 | Canola | cytosol | 47.91 | 60.87 |
| CDX97899 | Canola | peroxisome | 60.46 | 60.69 |
| CDY16437 | Canola | mitochondrion | 61.22 | 60.53 |
| CDY09823 | Canola | peroxisome | 62.36 | 60.52 |
| CDY45432 | Canola | cytosol | 60.08 | 60.31 |
| CDY40175 | Canola | plasma membrane | 59.7 | 59.92 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 59.32 | 59.54 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 59.32 | 59.54 |
| CDY45438 | Canola | cytosol | 59.32 | 59.54 |
| CDY51372 | Canola | plastid | 63.12 | 59.5 |
| CDX95750 | Canola | cytosol | 61.98 | 59.49 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 61.22 | 59.41 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 58.94 | 59.39 |
| CDY40165 | Canola | plastid | 58.94 | 59.16 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 58.94 | 58.94 |
| CDY45441 | Canola | cytosol | 50.19 | 58.93 |
| KRG97870 | Soybean | mitochondrion | 55.89 | 58.8 |
| CDX97897 | Canola | cytosol, extracellular | 51.33 | 58.44 |
| CDY40185 | Canola | plastid | 57.79 | 58.02 |
| KRG97857 | Soybean | mitochondrion | 55.13 | 58.0 |
| TraesCS4D01G210700.1 | Wheat | plastid | 69.58 | 57.73 |
| CDX97895 | Canola | cytosol | 51.33 | 57.45 |
| CDY31774 | Canola | cytosol | 51.33 | 57.45 |
| Os03t0269100-02 | Rice | mitochondrion, plastid | 66.54 | 56.82 |
| EES08074 | Sorghum | plastid | 64.64 | 56.48 |
| OQU92858 | Sorghum | cytosol, peroxisome, plastid | 65.78 | 56.17 |
| CDY40171 | Canola | cytosol | 47.15 | 56.11 |
| KRH31021 | Soybean | mitochondrion | 63.88 | 55.45 |
| VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 60.08 | 55.44 |
| CDY45433 | Canola | cytosol | 50.95 | 54.69 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 21.67 | 54.29 |
| CDY35991 | Canola | plastid | 25.48 | 54.03 |
| CDY72061 | Canola | cytosol | 22.05 | 53.21 |
| CDY31770 | Canola | plastid | 46.77 | 53.02 |
| HORVU4Hr1G060330.1 | Barley | mitochondrion | 64.26 | 52.81 |
| CDX95752 | Canola | cytosol | 46.39 | 51.26 |
| CDY40177 | Canola | cytosol | 51.33 | 48.74 |
| CDX97890 | Canola | cytosol | 62.74 | 48.67 |
| OQU91956 | Sorghum | extracellular, peroxisome | 50.19 | 41.25 |
| CDY65683 | Canola | cytosol, mitochondrion | 62.36 | 41.1 |
| CDY35231 | Canola | peroxisome | 17.49 | 37.1 |
| CDY16690 | Canola | peroxisome | 32.7 | 33.73 |
| CDX94534 | Canola | peroxisome | 31.94 | 32.94 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 31.18 | 31.78 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 30.8 | 31.52 |
| CDY31767 | Canola | plastid | 63.88 | 29.84 |
| CDY43488 | Canola | cytosol | 30.8 | 28.03 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 29.66 | 27.18 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 29.28 | 26.64 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 6.46 | 24.29 |
| CDY05152 | Canola | cytosol | 21.67 | 23.85 |
| CDX73802 | Canola | peroxisome | 26.62 | 23.49 |
| CDY00799 | Canola | peroxisome | 26.24 | 23.15 |
| CDY08402 | Canola | cytosol | 25.86 | 23.13 |
| CDY50145 | Canola | plastid | 62.36 | 22.65 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:A0A078FMK7 | UniProt:A0A078FMK7 | EnsemblPlants:CDY14094 | ProteinID:CDY14094 |
| ProteinID:CDY14094.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00078633001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF3 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI0004EE4BD1 | SEG:seg | : | : | : | : |
Description
BnaC02g02110DBnaC02g02110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMK7]
Coordinates
chrLK032040:+:416273..418341
Molecular Weight (calculated)
28244.6 Da
IEP (calculated)
6.130
GRAVY (calculated)
-0.008
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MENNDKRWSL AGKTALVTGG TRGIGRAVVE ELARFGATVH TCSRNQEELE SCLDDWKSNG LVVTGSVCDA SVRDQREKLI QEVSSAFSGK LNILINNVGT
101: NLRKPTVEYS SEDYAKIMST NLESAFHFSQ IAHPLLKASG VGSIVFISSV AGLVHVSSGS VYGATKGALN QLTRNLACEW AGDNIRTNCV APWYIKTSLV
201: KPLLEKEGFE EAIVSRTPLG RVGEPEEVSS LVAFLCLPAA SYITGQVISV DGGFTVNGFS YTM
101: NLRKPTVEYS SEDYAKIMST NLESAFHFSQ IAHPLLKASG VGSIVFISSV AGLVHVSSGS VYGATKGALN QLTRNLACEW AGDNIRTNCV APWYIKTSLV
201: KPLLEKEGFE EAIVSRTPLG RVGEPEEVSS LVAFLCLPAA SYITGQVISV DGGFTVNGFS YTM
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.