Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 1
- plastid 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G094400.1 | Wheat | plastid | 97.06 | 97.06 |
| TraesCS4D01G210800.1 | Wheat | plastid | 96.69 | 96.69 |
| TraesCS4B01G210000.1 | Wheat | plastid | 96.32 | 96.32 |
| Zm00001d028575_P001 | Maize | extracellular | 83.82 | 83.52 |
| Os03t0269000-01 | Rice | plastid | 65.07 | 83.1 |
| GSMUA_Achr10P... | Banana | cytosol | 73.53 | 73.8 |
| OQU92858 | Sorghum | cytosol, peroxisome, plastid | 83.09 | 73.38 |
| VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 69.49 | 70.52 |
| AT5G06060.1 | Thale cress | peroxisome | 68.38 | 70.45 |
| CDY14094 | Canola | peroxisome | 67.65 | 69.96 |
| CDY04977 | Canola | peroxisome | 67.65 | 69.96 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 68.38 | 69.4 |
| Bra028744.1-P | Field mustard | cytosol | 66.91 | 69.2 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 67.28 | 68.03 |
| CDX98899 | Canola | peroxisome | 65.44 | 67.94 |
| CDY04975 | Canola | mitochondrion | 27.21 | 66.07 |
| Bra009159.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 63.6 | 66.03 |
| CDX70101 | Canola | peroxisome | 63.6 | 66.03 |
| VIT_13s0019g02140.t01 | Wine grape | peroxisome | 64.34 | 64.58 |
| KRH31007 | Soybean | mitochondrion | 64.34 | 64.58 |
| VIT_13s0019g02130.t01 | Wine grape | peroxisome | 62.5 | 63.43 |
| KRH31025 | Soybean | plastid | 63.97 | 62.82 |
| KRG97870 | Soybean | mitochondrion | 56.62 | 61.6 |
| HORVU4Hr1G060330.1 | Barley | mitochondrion | 72.06 | 61.25 |
| KRG97856 | Soybean | mitochondrion, plastid | 61.03 | 61.03 |
| KRH31026 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 60.29 | 60.29 |
| Solyc03g096660.1.1 | Tomato | extracellular | 41.18 | 57.44 |
| PGSC0003DMT400043152 | Potato | peroxisome | 58.46 | 57.4 |
| KRG97857 | Soybean | mitochondrion | 51.84 | 56.4 |
| VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 58.82 | 56.14 |
| KRH31021 | Soybean | mitochondrion | 59.19 | 53.14 |
| HORVU1Hr1G086200.3 | Barley | peroxisome, plastid | 51.47 | 52.24 |
| HORVU3Hr1G097180.1 | Barley | peroxisome, plastid | 52.94 | 51.99 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 59.19 | 51.94 |
| HORVU1Hr1G086190.1 | Barley | peroxisome | 35.66 | 50.0 |
| HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 48.16 | 49.81 |
| HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 50.37 | 48.75 |
| HORVU5Hr1G007770.4 | Barley | peroxisome | 48.53 | 47.65 |
| HORVU0Hr1G027400.1 | Barley | peroxisome | 34.56 | 46.77 |
| HORVU2Hr1G091780.5 | Barley | mitochondrion, plastid | 46.32 | 46.67 |
| HORVU3Hr1G090170.2 | Barley | mitochondrion, plastid | 50.74 | 44.95 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 31.62 | 33.99 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 24.63 | 26.48 |
| HORVU2Hr1G098920.1 | Barley | peroxisome | 25.74 | 23.41 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 30.15 | 20.55 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:HORVU4Hr1G060350 | EnsemblPlants:HORVU4Hr1G060350.3 | UniProt:M0VNR7 | InterPro:NAD(P)-bd_dom_sf |
| PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF14 |
| InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | TMHMM:TMhelix | UniParc:UPI0001AE6176 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:507099983..507105979
Molecular Weight (calculated)
28794.5 Da
IEP (calculated)
7.372
GRAVY (calculated)
0.055
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAETSGSS QPGAPGRWSL HGKTALVTGG TRGIGRAVVE ELAALGAAVH TCSRKEAELG ERLKEWEARG FRVTTSVCDL SVREQRERLI GEVAERFGGK
101: LNILVNNVGT NIRKPTTEFS AEDYSFLMAT NLESAYHLCQ LAHPLLKASG LGSIVFVSSV CGLVAVFSGS IYAMTKGAIN QLTKNLACEW AKDGIRTNSV
201: APWYITTSLT EGLLANKEFE ASVVSRTPLG RVGEPGEVSS LVAFLCMPGA TYITGQTISV DGGMTVNGMY PA
101: LNILVNNVGT NIRKPTTEFS AEDYSFLMAT NLESAYHLCQ LAHPLLKASG LGSIVFVSSV CGLVAVFSGS IYAMTKGAIN QLTKNLACEW AKDGIRTNSV
201: APWYITTSLT EGLLANKEFE ASVVSRTPLG RVGEPGEVSS LVAFLCMPGA TYITGQTISV DGGMTVNGMY PA
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.