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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, plastid, nucleus

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • plastid 3
  • peroxisome 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, nucleus, peroxisome, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29330.1 21798944
AT5G06060.1 VIT_06s0004g05310.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05320.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05330.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05360.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05370.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05380.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05390.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05400.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05430.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05440.t01 AT2G29360.1 21798944
AT5G06060.1 VIT_06s0004g05450.t01 AT2G29360.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_13s0019g02180.t01 Wine grape peroxisome, plasma membrane, plastid 74.39 79.1
VIT_06s0004g05440.t01 Wine grape cytosol 20.0 69.51
VIT_06s0004g05400.t01 Wine grape cytosol 27.02 69.37
VIT_06s0004g05310.t01 Wine grape cytosol 26.67 67.26
Os03t0269000-01 Rice plastid 48.42 64.79
PGSC0003DMT400043159 Potato mitochondrion 60.7 64.31
Solyc03g096640.2.1 Tomato mitochondrion, plastid 60.35 64.18
GSMUA_Achr10P... Banana cytosol 60.7 63.84
VIT_13s0019g02130.t01 Wine grape peroxisome 60.0 63.81
VIT_13s0019g02140.t01 Wine grape peroxisome 58.6 61.62
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 54.04 61.11
AT5G06060.1 Thale cress peroxisome 56.14 60.61
CDY14094 Canola peroxisome 55.44 60.08
CDY04977 Canola peroxisome 55.44 60.08
KRH31026 Soybean cytosol, mitochondrion, peroxisome, plastid 57.19 59.93
CDX98899 Canola peroxisome 55.09 59.92
VIT_06s0004g05370.t01 Wine grape peroxisome 52.98 59.92
TraesCS4A01G094500.1 Wheat cytosol, peroxisome, plastid 56.84 59.78
Bra028744.1-P Field mustard cytosol 54.74 59.32
TraesCS4B01G209900.1 Wheat peroxisome 56.14 59.26
KRG97856 Soybean mitochondrion, plastid 56.49 59.19
VIT_06s0004g05380.t01 Wine grape plastid 55.79 58.89
HORVU4Hr1G060350.3 Barley plastid 56.14 58.82
KRH31007 Soybean mitochondrion 55.79 58.67
Zm00001d028575_P001 Maize extracellular 56.14 58.61
Os03t0268900-02 Rice plastid 55.44 58.52
TraesCS4A01G094400.1 Wheat plastid 55.79 58.46
VIT_06s0004g05280.t01 Wine grape cytosol, nucleus, peroxisome 51.58 58.33
TraesCS4D01G210800.1 Wheat plastid 55.44 58.09
KRH31025 Soybean plastid 56.14 57.76
TraesCS4B01G210000.1 Wheat plastid 55.09 57.72
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 54.39 57.41
CDX70101 Canola peroxisome 52.63 57.25
Bra009159.1-P Field mustard cytosol, mitochondrion, peroxisome, plasma membrane 52.28 56.87
VIT_08s0007g00900.t01 Wine grape mitochondrion, plastid 52.28 56.87
VIT_08s0007g00890.t01 Wine grape peroxisome 49.47 56.4
VIT_08s0007g00920.t01 Wine grape peroxisome 52.63 56.18
KRG97857 Soybean mitochondrion 49.12 56.0
VIT_06s0004g05330.t01 Wine grape peroxisome 49.12 55.12
PGSC0003DMT400043152 Potato peroxisome 53.33 54.87
KRG97870 Soybean mitochondrion 46.67 53.2
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 44.21 52.5
OQU92858 Sorghum cytosol, peroxisome, plastid 55.79 51.62
TraesCS4D01G210700.1 Wheat plastid 56.84 51.1
KRH31021 Soybean mitochondrion 54.04 50.83
Solyc03g096660.1.1 Tomato extracellular 34.74 50.77
EES08074 Sorghum plastid 52.63 49.83
Os03t0269100-02 Rice mitochondrion, plastid 53.68 49.68
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 41.75 48.37
HORVU4Hr1G060330.1 Barley mitochondrion 52.28 46.56
CDY04975 Canola mitochondrion 18.25 46.43
VIT_06s0004g05450.t01 Wine grape plasma membrane 28.77 45.56
CDX98898 Canola cytosol, peroxisome, plasma membrane 49.12 45.16
OQU91956 Sorghum extracellular, peroxisome 44.91 40.0
VIT_17s0000g08740.t01 Wine grape cytosol 10.53 24.39
VIT_19s0085g00500.t01 Wine grape peroxisome 23.51 22.56
VIT_01s0011g01520.t01 Wine grape peroxisome 23.16 22.22
VIT_14s0128g00340.t01 Wine grape plastid 21.75 18.18
VIT_00s0516g00030.t01 Wine grape cytosol, peroxisome 23.86 6.61
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1ProteinID:CCB56315ProteinID:CCB56315.1UniProt:F6HNU5EMBL:FN595998
GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114
InterPro:NAD(P)-bd_dom_sfPFAM:PF00106PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898
PANTHER:PTHR42898:SF3InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSUniParc:UPI0002107FE3ArrayExpress:VIT_13s0019g02170
EnsemblPlantsGene:VIT_13s0019g02170EnsemblPlants:VIT_13s0019g02170.t01RefSeq:XP_002277835RefSeq:XP_002277835.1::
Description
No Description!
Coordinates
chr13:+:3455921..3459770
Molecular Weight (calculated)
30822.4 Da
IEP (calculated)
7.190
GRAVY (calculated)
-0.195
Length
285 amino acids
Sequence
(BLAST)
001: MAEGNGGFSS SGWSLRGTTA LVTGGTRGIG YAVVEELAGL GSTVHTCSRN EAELDKCLRE WHAKGFAVTG SVCDGSDRAQ REQLMEKVSS IFNGKLNILI
101: NNVGTNIRKP TVDFTAAEYS TIMTTNLESA YHLCQLAHPL LKASGAGSIV FISSVAGVLS LGTGSIYAAT KAAMNQLTKN LSCEWAKDNI RSNSVAPWYI
201: KTSLVEHLLQ KQDFFESNTP QTTRRAEGGL ISGGIPLPSC GFLHHRAGYL RGRWNDCEWF QSQHLKEEVS QLPGVTSFNE QISLD
Best Arabidopsis Sequence Match ( AT2G29350.2 )
(BLAST)
001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDVRP KFIFLLRTMK NKKNT
Arabidopsis Description
SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.