Factsheet for VIT_06s0004g05360.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 3
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0004g05310.t01
VIT_06s0004g05320.t01
VIT_06s0004g05330.t01
VIT_06s0004g05360.t01
VIT_06s0004g05370.t01
VIT_06s0004g05380.t01
VIT_06s0004g05390.t01
VIT_06s0004g05400.t01
VIT_06s0004g05430.t01
VIT_06s0004g05440.t01
VIT_06s0004g05450.t01
VIT_12s0028g02240.t01
VIT_13s0019g02130.t01
VIT_13s0019g02140.t01
VIT_13s0019g02170.t01
VIT_13s0019g02180.t01
VIT_18s0001g09830.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07440.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT1G07440.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT1G07450.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT1G07450.1	VIT_06s0004g05310.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05320.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05330.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05360.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05370.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05380.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05390.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05400.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05430.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05440.t01	AT2G29350.1	21798944
AT1G07450.1	VIT_06s0004g05450.t01	AT2G29350.1	21798944
AT2G29310.1	VIT_06s0004g05310.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05320.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05330.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05360.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05370.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05380.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05390.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05400.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05430.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05440.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05450.t01	AT1G07450.1	21798944
AT2G29310.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29310.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29320.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29330.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT2G29330.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT2G29340.1	VIT_12s0028g02240.t01	AT2G42580.1	19000166
AT2G29340.1	VIT_18s0001g09830.t01	AT2G42580.1	19000166
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29310.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29320.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29350.1	21798944
AT2G29350.1	VIT_06s0004g05310.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05320.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05330.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05360.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05370.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05380.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05390.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05400.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05430.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05440.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_06s0004g05450.t01	AT2G29360.1	21798944
AT2G29350.1	VIT_13s0019g02130.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02140.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02170.t01	AT5G06060.1	21798944
AT2G29350.1	VIT_13s0019g02180.t01	AT5G06060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g05370.t01	Wine grape	peroxisome	83.75	79.76
VIT_06s0004g05440.t01	Wine grape	cytosol	25.0	73.17
VIT_06s0004g05400.t01	Wine grape	cytosol	33.33	72.07
VIT_06s0004g05310.t01	Wine grape	cytosol	33.33	70.8
VIT_06s0004g05380.t01	Wine grape	plastid	74.58	66.3
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	68.75	65.48
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	72.92	64.81
Solyc03g096650.1.1	Tomato	cytosol	23.33	62.92
AT2G29170.1	Thale cress	cytosol	27.92	62.62
VIT_06s0004g05330.t01	Wine grape	peroxisome	65.42	61.81
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	61.67	60.16
CDY72061	Canola	cytosol	26.67	58.72
Bra027962.1-P	Field mustard	cytosol	42.08	58.38
CDY64214	Canola	mitochondrion	41.25	57.89
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	64.58	57.84
VIT_06s0004g05280.t01	Wine grape	cytosol, nucleus, peroxisome	59.58	56.75
AT2G29360.1	Thale cress	cytosol	62.92	55.72
AT2G29290.2	Thale cress	plastid	60.0	54.96
AT2G29150.1	Thale cress	peroxisome	61.25	54.85
AT2G29370.1	Thale cress	peroxisome	61.25	54.85
AT2G29350.1	Thale cress	plastid	61.25	54.65
VIT_13s0019g02140.t01	Wine grape	peroxisome	61.25	54.24
VIT_13s0019g02130.t01	Wine grape	peroxisome	60.42	54.1
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	58.75	53.82
CDX86486	Canola	cytosol, peroxisome, plastid	58.75	53.82
CDY68057	Canola	cytosol	58.33	53.44
CDX95750	Canola	cytosol	60.83	53.28
CDX97893	Canola	mitochondrion	60.0	53.14
CDY09823	Canola	peroxisome	60.0	53.14
CDY09824	Canola	mitochondrion	60.0	53.14
AT1G07450.1	Thale cress	cytosol, nucleus, peroxisome	57.5	53.08
CDX86485	Canola	cytosol, peroxisome, plastid	57.92	53.05
Bra015580.1-P	Field mustard	mitochondrion	58.75	53.01
CDY06706	Canola	mitochondrion	58.75	53.01
Bra039976.1-P	Field mustard	cytosol	59.58	52.77
CDY31776	Canola	cytosol, peroxisome, plastid	59.58	52.77
VIT_08s0007g00890.t01	Wine grape	peroxisome	54.58	52.4
AT1G07440.1	Thale cress	mitochondrion	57.5	51.88
CDY10276	Canola	mitochondrion	57.5	51.88
CDY14610	Canola	mitochondrion	57.5	51.88
CDY52942	Canola	mitochondrion	57.5	51.88
CDY40179	Canola	cytosol, peroxisome, plastid	56.25	51.72
CDY51372	Canola	plastid	60.0	51.61
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	56.25	51.53
Bra018396.1-P	Field mustard	cytosol	56.25	51.53
CDY09917	Canola	cytosol	56.25	51.53
CDY40188	Canola	cytosol, peroxisome, plasma membrane	56.25	51.53
CDY45434	Canola	cytosol, nucleus, plastid	56.25	51.53
CDY45438	Canola	cytosol	56.25	51.53
Bra039755.1-P	Field mustard	mitochondrion	57.08	51.5
CDY16437	Canola	mitochondrion	57.08	51.5
AT2G29330.1	Thale cress	cytosol, peroxisome, plastid	55.42	51.15
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	55.83	51.15
Bra018393.1-P	Field mustard	cytosol	55.83	51.15
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	55.83	51.15
Bra031575.1-P	Field mustard	plastid	55.83	51.15
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	55.42	50.76
CDY06260	Canola	plastid	55.42	50.76
CDY31772	Canola	cytosol, peroxisome, plastid	55.42	50.76
CDY40183	Canola	plastid	55.42	50.76
CDY45432	Canola	cytosol	55.42	50.76
VIT_08s0007g00900.t01	Wine grape	mitochondrion, plastid	55.42	50.76
AT2G29320.1	Thale cress	mitochondrion	56.67	50.56
Bra018391.1-P	Field mustard	cytosol	55.0	50.38
CDX95751	Canola	peroxisome	55.0	50.38
CDY40186	Canola	cytosol	43.33	50.24
Bra018402.1-P	Field mustard	cytosol	45.83	50.23
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	55.0	50.19
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.58	50.0
CDX97899	Canola	peroxisome	54.58	50.0
CDY31773	Canola	plastid	54.58	50.0
CDY40165	Canola	plastid	54.58	50.0
CDY40175	Canola	plasma membrane	54.58	50.0
KRH29740	Soybean	cytosol	20.42	50.0
VIT_08s0007g00920.t01	Wine grape	peroxisome	55.42	49.81
Bra039969.1-P	Field mustard	cytosol	54.58	49.81
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	54.58	49.81
Bra018405.1-P	Field mustard	cytosol	54.17	49.62
Bra039513.1-P	Field mustard	peroxisome	54.17	49.62
Bra039973.1-P	Field mustard	plastid	54.17	49.62
GSMUA_Achr5P04570_001	Banana	cytosol	26.25	49.61
CDY45441	Canola	cytosol	46.25	49.55
VIT_06s0004g05450.t01	Wine grape	plasma membrane	37.08	49.44
AT2G29310.1	Thale cress	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	53.75	49.24
CDX83307	Canola	peroxisome	53.75	49.24
KRH24731	Soybean	nucleus	54.58	49.06
KRH24733	Soybean	nucleus	54.17	49.06
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	53.33	48.85
CDY31768	Canola	cytosol, peroxisome, plastid	53.33	48.85
CDY45433	Canola	cytosol	49.58	48.57
CDY31774	Canola	cytosol	47.5	48.51
Bra039967.1-P	Field mustard	plastid	52.92	48.47
CDY45435	Canola	cytosol, peroxisome, plastid	52.92	48.47
Bra039977.1-P	Field mustard	plastid	38.75	48.19
Bra000477.1-P	Field mustard	plastid	52.5	48.09
CDX83306	Canola	plastid	52.5	48.09
CDY40182	Canola	cytosol, peroxisome, plastid	52.5	48.09
CDX97895	Canola	cytosol	47.08	48.09
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	53.75	47.96
CDX95753	Canola	cytosol, peroxisome, plastid	52.08	47.71
Bra018401.1-P	Field mustard	cytosol	50.0	47.43
Bra018404.1-P	Field mustard	cytosol	36.67	47.31
AT2G29300.2	Thale cress	extracellular	56.25	47.2
CDX97897	Canola	cytosol, extracellular	45.42	47.19
CDY40185	Canola	plastid	51.25	46.95
CDY40171	Canola	cytosol	42.08	45.7
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	52.5	44.21
CDY31770	Canola	plastid	42.5	43.97
Bra039966.1-P	Field mustard	cytosol	52.5	43.75
AT2G29340.1	Thale cress	cytosol, endoplasmic reticulum, peroxisome	55.0	43.0
CDX97890	Canola	cytosol	59.17	41.89
CDY40177	Canola	cytosol	48.33	41.88
CDX95752	Canola	cytosol	40.42	40.76
Bra027961.1-P	Field mustard	cytosol	46.67	36.96
CDY16436	Canola	endoplasmic reticulum, vacuole	15.42	35.24
CDY65683	Canola	cytosol, mitochondrion	56.25	33.83
CDY31767	Canola	plastid	59.17	25.22
VIT_19s0085g00500.t01	Wine grape	peroxisome	24.17	19.53
VIT_01s0011g01520.t01	Wine grape	peroxisome	22.5	18.18
VIT_14s0128g00340.t01	Wine grape	plastid	25.83	18.18
CDY50145	Canola	plastid	54.17	17.96
VIT_17s0000g08740.t01	Wine grape	cytosol	6.25	12.2
VIT_00s0516g00030.t01	Wine grape	cytosol, peroxisome	23.33	5.44

Protein Annotations

ArrayExpress:VIT_06s0004g05360	EMBL:FN594951	EnsemblPlants:VIT_06s0004g05360.t01	EnsemblPlantsGene:VIT_06s0004g05360	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00081
ProteinID:CCB43540	ProteinID:CCB43540.1	SUPFAM:SSF51735	UniParc:UPI00021091CC	UniProt:F6GUY2	MapMan:50.1.1

Description

No Description!

Coordinates

chr6:+:6225292..6226453

Molecular Weight (calculated)

25720.7 Da

IEP (calculated)

7.050

GRAVY (calculated)

-0.051

Length

240 amino acids

Sequence
(BLAST)

001: MAQTGCSNGD NRWSLKGMTA LVTGGMNFDL HAVVEELTGL GARIHTCSRT ETGLNEYLRD WEGKGFEVTG SVCDVSSRAQ REKLMETVSS KFNGKLNILI
101: NNAGTGKPGR TVEFAAEEFS TVMAVNFESV YHLCQLAHPL LKASGAGSIV LMSCVSGVVS LKYLSAYGAT KGTSCHHRFL SEKSFTEEVI RRTPLGRVGD
201: PKEVSSLVAF LCLPVSSYIT GQTICADGGM NVNGFDPSQC

Best Arabidopsis Sequence Match ( AT2G29150.1 )
(BLAST)

001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP

Arabidopsis Description

Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.