Factsheet for Bra039977.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000476.1-P
Bra009159.1-P
Bra028744.1-P
Bra039513.1-P
Bra039514.1-P
Bra039977.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G29350.1	Bra000476.1-P	AT2G29310.1	21798944
AT2G29350.1	Bra039514.1-P	AT2G29310.1	21798944
AT2G29350.1	Bra039513.1-P	AT2G29320.1	21798944
AT2G29350.1	Bra039977.1-P	AT2G29350.1	21798944
AT2G29350.1	Bra009159.1-P	AT5G06060.1	21798944
AT2G29350.1	Bra028744.1-P	AT5G06060.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51372	Canola	plastid	94.82	65.59
Bra018404.1-P	Field mustard	cytosol	59.07	61.29
CDX97890	Canola	cytosol	95.85	54.57
AT2G29290.2	Thale cress	plastid	73.06	53.82
Bra039976.1-P	Field mustard	cytosol	75.13	53.51
AT2G29350.1	Thale cress	plastid	74.09	53.16
Bra018402.1-P	Field mustard	cytosol	59.59	52.51
VIT_06s0004g05450.t01	Wine grape	plasma membrane	44.56	47.78
VIT_06s0004g05370.t01	Wine grape	peroxisome	60.1	46.03
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	59.59	45.63
Bra015580.1-P	Field mustard	mitochondrion	62.18	45.11
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	61.14	45.04
VIT_06s0004g05330.t01	Wine grape	peroxisome	59.07	44.88
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	60.62	44.66
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.62	44.66
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	60.62	44.66
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	60.62	44.66
Bra018396.1-P	Field mustard	cytosol	60.1	44.27
Bra018393.1-P	Field mustard	cytosol	60.1	44.27
Bra018391.1-P	Field mustard	cytosol	59.59	43.89
Bra028744.1-P	Field mustard	cytosol	59.59	43.73
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	59.59	43.73
Bra039755.1-P	Field mustard	mitochondrion	60.1	43.61
Bra039969.1-P	Field mustard	cytosol	59.07	43.35
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	58.55	43.13
Bra031575.1-P	Field mustard	plastid	58.55	43.13
Bra039967.1-P	Field mustard	plastid	58.03	42.75
Bra000477.1-P	Field mustard	plastid	58.03	42.75
Bra018405.1-P	Field mustard	cytosol	58.03	42.75
Bra039513.1-P	Field mustard	peroxisome	57.51	42.37
VIT_06s0004g05380.t01	Wine grape	plastid	59.07	42.22
Bra018401.1-P	Field mustard	cytosol	54.92	41.9
Bra039966.1-P	Field mustard	cytosol	62.18	41.67
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	56.48	41.6
Bra039973.1-P	Field mustard	plastid	55.96	41.22
KRH24731	Soybean	nucleus	56.99	41.2
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	56.99	40.89
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	55.96	40.0
KRH24733	Soybean	nucleus	54.92	40.0
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	48.19	38.75
Bra027961.1-P	Field mustard	cytosol	56.99	36.3
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	43.52	34.15
Bra027962.1-P	Field mustard	cytosol	29.53	32.95
KRH29740	Soybean	cytosol	14.51	28.57
VIT_06s0004g05400.t01	Wine grape	cytosol	15.03	26.13
VIT_06s0004g05310.t01	Wine grape	cytosol	15.03	25.66
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	20.73	24.54
Bra029476.1-P	Field mustard	peroxisome	29.02	21.96
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	25.39	19.07
Bra021324.1-P	Field mustard	cytosol	28.5	19.03
Solyc03g096650.1.1	Tomato	cytosol	8.29	17.98
Bra034728.1-P	Field mustard	cytosol	24.87	16.33
Bra001471.1-P	Field mustard	peroxisome	23.83	15.44
GSMUA_Achr5P04570_001	Banana	cytosol	8.29	12.6
VIT_06s0004g05440.t01	Wine grape	cytosol	5.18	12.2

Protein Annotations

EnsemblPlants:Bra039977.1	EnsemblPlants:Bra039977.1-P	EnsemblPlantsGene:Bra039977	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	SUPFAM:SSF51735	UniParc:UPI0002544238	UniProt:M4FFV3	MapMan:50.1.1	:

Description

AT2G29350 (E=6e-075) SAG13 | SAG13; alcohol dehydrogenase/ oxidoreductase

Coordinates

chrA04:+:13204035..13205206

Molecular Weight (calculated)

20541.7 Da

IEP (calculated)

5.147

GRAVY (calculated)

0.294

Length

193 amino acids

Sequence
(BLAST)

001: METVSSLFQG KLNILVNNAG TSIVKPTTEF SSEDFSFLMA TNLESAFHLS QLAHPLLKAS GSGSIVLMSS AAGVVHMSVG SIYGASKGAM NQLARNLACE
101: WAIDNIRVNS VCPWFITTPL AVSLFRSDEN IKEKVESRTP MQRVGEANVS SLVAFLCLPA ASYITGQSIC IDGVISEDVP GMHDGIVQFN PVA

Best Arabidopsis Sequence Match ( AT2G29150.1 )
(BLAST)

001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP

Arabidopsis Description

Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.