Factsheet for Bra015580.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000476.1-P
Bra039514.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07440.1	Bra000476.1-P	AT2G29310.1	21798944
AT1G07440.1	Bra039514.1-P	AT2G29310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06706	Canola	mitochondrion	100.0	100.0
AT1G07440.1	Thale cress	mitochondrion	83.83	83.83
Bra039755.1-P	Field mustard	mitochondrion	79.7	79.7
Bra027962.1-P	Field mustard	cytosol	50.0	76.88
Bra018404.1-P	Field mustard	cytosol	51.13	73.12
Bra018402.1-P	Field mustard	cytosol	59.77	72.6
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	69.17	70.23
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	68.42	69.47
Bra018396.1-P	Field mustard	cytosol	68.42	69.47
Bra018405.1-P	Field mustard	cytosol	68.42	69.47
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	68.05	69.08
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	68.05	69.08
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	68.05	69.08
Bra018391.1-P	Field mustard	cytosol	67.67	68.7
Bra018393.1-P	Field mustard	cytosol	67.29	68.32
Bra018401.1-P	Field mustard	cytosol	64.66	67.98
Bra039967.1-P	Field mustard	plastid	66.92	67.94
Bra031575.1-P	Field mustard	plastid	66.92	67.94
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	66.54	67.56
Bra039973.1-P	Field mustard	plastid	66.17	67.18
Bra039513.1-P	Field mustard	peroxisome	66.17	67.18
VIT_06s0004g05440.t01	Wine grape	cytosol	20.68	67.07
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	65.79	66.54
Bra039969.1-P	Field mustard	cytosol	65.79	66.54
Bra000477.1-P	Field mustard	plastid	65.04	66.03
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	62.03	65.48
VIT_06s0004g05400.t01	Wine grape	cytosol	27.07	64.86
Bra039976.1-P	Field mustard	cytosol	65.79	64.58
VIT_06s0004g05370.t01	Wine grape	peroxisome	60.9	64.29
VIT_06s0004g05310.t01	Wine grape	cytosol	27.07	63.72
VIT_06s0004g05380.t01	Wine grape	plastid	64.29	63.33
Bra028744.1-P	Field mustard	cytosol	62.41	63.12
Solyc03g096650.1.1	Tomato	cytosol	21.05	62.92
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.28	62.21
Bra039977.1-P	Field mustard	plastid	45.11	62.18
Bra039966.1-P	Field mustard	cytosol	66.92	61.81
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	62.03	61.11
KRH24731	Soybean	nucleus	60.9	60.67
VIT_06s0004g05330.t01	Wine grape	peroxisome	57.89	60.63
Bra027961.1-P	Field mustard	cytosol	68.8	60.4
KRH24733	Soybean	nucleus	58.65	58.87
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	53.01	58.75
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	57.52	56.88
VIT_06s0004g05450.t01	Wine grape	plasma membrane	36.47	53.89
GSMUA_Achr5P04570_001	Banana	cytosol	25.19	52.76
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.5	52.44
KRH29740	Soybean	cytosol	19.17	52.04
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	29.32	47.85
Bra029476.1-P	Field mustard	peroxisome	30.45	31.76
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	28.57	29.57
Bra021324.1-P	Field mustard	cytosol	30.83	28.37
Bra034728.1-P	Field mustard	cytosol	26.69	24.15
Bra001471.1-P	Field mustard	peroxisome	26.69	23.83

Protein Annotations

EnsemblPlants:Bra015580.1	EnsemblPlants:Bra015580.1-P	EnsemblPlantsGene:Bra015580	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	SUPFAM:SSF51735	UniParc:UPI0002544BD2	UniProt:M4DGF6	MapMan:50.1.1	:

Description

AT1G07440 (E=9e-131) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA10:+:892378..893678

Molecular Weight (calculated)

28352.9 Da

IEP (calculated)

7.222

GRAVY (calculated)

0.055

Length

266 amino acids

Sequence
(BLAST)

001: MAGAEQLQRW SLRAKTALVT GGTKGIGHAV VEELARFGAI IHTCGRDESQ LNECISHWQK KGFHVTGSVC DVTSRTDREK LMETVSSMFG GKLDILINNV
101: GAIRSKPTVE HTADDFSFHI STNLESAFHL SQLSHPLLKA SGCGSIVFMS SVAGVVSLSI SSIYCATKGA MNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAKAVYDDDF KKAVTSRKPL GRFGEPEEVA SLVAFLCMPA ASYITGQTIC VDGGLSVNGF SYQPHD

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.