Factsheet for Bra039973.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31773	Canola	plastid	98.09	98.09
CDX97897	Canola	cytosol, extracellular	85.11	96.54
Bra039967.1-P	Field mustard	plastid	90.08	90.08
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.79	87.79
Bra039513.1-P	Field mustard	peroxisome	85.11	85.11
Bra018405.1-P	Field mustard	cytosol	84.35	84.35
Bra018402.1-P	Field mustard	cytosol	69.47	83.11
Bra000477.1-P	Field mustard	plastid	82.82	82.82
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	82.82	82.82
Bra018404.1-P	Field mustard	cytosol	58.78	82.8
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	82.44	82.44
Bra018401.1-P	Field mustard	cytosol	79.01	81.82
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	81.3	81.3
Bra018391.1-P	Field mustard	cytosol	79.01	79.01
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	78.63	78.63
Bra018393.1-P	Field mustard	cytosol	78.63	78.63
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	77.86	77.57
Bra018396.1-P	Field mustard	cytosol	77.1	77.1
Bra039969.1-P	Field mustard	cytosol	77.1	76.81
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	70.23	70.23
Bra031575.1-P	Field mustard	plastid	69.85	69.85
Bra039966.1-P	Field mustard	cytosol	76.34	69.44
Solyc03g096650.1.1	Tomato	cytosol	22.52	66.29
Bra015580.1-P	Field mustard	mitochondrion	67.18	66.17
Bra039755.1-P	Field mustard	mitochondrion	66.03	65.04
Bra027962.1-P	Field mustard	cytosol	41.6	63.01
Bra028744.1-P	Field mustard	cytosol	61.45	61.22
KRH24733	Soybean	nucleus	61.83	61.13
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	58.78	61.11
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.07	61.07
KRH24731	Soybean	nucleus	61.07	59.93
VIT_06s0004g05380.t01	Wine grape	plastid	61.07	59.26
Bra039976.1-P	Field mustard	cytosol	60.69	58.67
VIT_06s0004g05400.t01	Wine grape	cytosol	24.81	58.56
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	60.31	58.52
VIT_06s0004g05370.t01	Wine grape	peroxisome	56.11	58.33
VIT_06s0004g05440.t01	Wine grape	cytosol	17.94	57.32
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	58.78	57.25
VIT_06s0004g05330.t01	Wine grape	peroxisome	55.34	57.09
VIT_06s0004g05310.t01	Wine grape	cytosol	24.43	56.64
Bra039977.1-P	Field mustard	plastid	41.22	55.96
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	49.62	54.17
KRH29740	Soybean	cytosol	20.23	54.08
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.47	51.63
Bra027961.1-P	Field mustard	cytosol	58.78	50.83
VIT_06s0004g05450.t01	Wine grape	plasma membrane	33.97	49.44
GSMUA_Achr5P04570_001	Banana	cytosol	22.9	47.24
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.48	44.17
Bra029476.1-P	Field mustard	peroxisome	29.77	30.59
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	28.63	29.18
Bra021324.1-P	Field mustard	cytosol	28.24	25.61
Bra034728.1-P	Field mustard	cytosol	24.43	21.77
Bra001471.1-P	Field mustard	peroxisome	24.05	21.14

Protein Annotations

EnsemblPlants:Bra039973.1	EnsemblPlants:Bra039973.1-P	EnsemblPlantsGene:Bra039973	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
UniParc:UPI0002544234	UniProt:M4FFU9	MapMan:50.1.1	:	:	:

Description

AT2G29300 (E=2e-125) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA04:+:13168582..13169724

Molecular Weight (calculated)

27815.2 Da

IEP (calculated)

6.898

GRAVY (calculated)

0.118

Length

262 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGAAG IGYAIVEELA SFGAKVHVCD ISETLLNQSL SEWGKKGFKV SGSVCDVTSR PERETLIQKV SSLFDGKLNI LVNNVGVLRG
101: KPTTEYGADD FAFHISTNLE SAYHFCQLSH LLLKASGYGS IVFISSVSGA VSINGASIYS LTKGALNQLA RNLACEWAKD GIRANAVAPN IIKTPQAQPY
201: LEDVSFREGL FGRTPLGRAG EPNEVAALVV FLCLPAASYI TGQTICADGG LTVNGFSYQP QA

Best Arabidopsis Sequence Match ( AT2G29310.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.