Factsheet for Bra009159.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 2
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra018400.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G06060.1	Bra018400.1-P	AT2G29330.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70101	Canola	peroxisome	98.86	98.86
Bra028744.1-P	Field mustard	cytosol	83.21	82.89
AT5G06060.1	Thale cress	peroxisome	83.21	82.58
CDX98898	Canola	cytosol, peroxisome, plasma membrane	90.84	76.77
Solyc03g096640.2.1	Tomato	mitochondrion, plastid	68.7	67.16
PGSC0003DMT400043159	Potato	mitochondrion	68.7	66.91
VIT_13s0019g02180.t01	Wine grape	peroxisome, plasma membrane, plastid	67.56	66.04
HORVU4Hr1G060350.3	Barley	plastid	66.03	63.6
Bra031575.1-P	Field mustard	plastid	62.98	62.98
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	62.98	62.98
TraesCS4A01G094400.1	Wheat	plastid	64.89	62.5
GSMUA_Achr10P...	Banana	cytosol	64.5	62.36
TraesCS4D01G210800.1	Wheat	plastid	64.5	62.13
TraesCS4B01G210000.1	Wheat	plastid	64.5	62.13
Zm00001d028575_P001	Maize	extracellular	64.5	61.9
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	61.83	61.83
KRH31007	Soybean	mitochondrion	63.74	61.62
Bra015580.1-P	Field mustard	mitochondrion	62.21	61.28
Bra027962.1-P	Field mustard	cytosol	40.46	61.27
Os03t0268900-02	Rice	plastid	62.98	61.11
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	61.07	61.07
Bra039973.1-P	Field mustard	plastid	61.07	61.07
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	61.07	61.07
Bra039513.1-P	Field mustard	peroxisome	61.07	61.07
Bra018404.1-P	Field mustard	cytosol	43.13	60.75
TraesCS4B01G209900.1	Wheat	peroxisome	62.6	60.74
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	60.69	60.69
Bra018393.1-P	Field mustard	cytosol	60.69	60.69
Bra039967.1-P	Field mustard	plastid	60.69	60.69
TraesCS4A01G094500.1	Wheat	cytosol, peroxisome, plastid	62.6	60.52
Bra018396.1-P	Field mustard	cytosol	60.31	60.31
PGSC0003DMT400043152	Potato	peroxisome	63.36	59.93
Bra000477.1-P	Field mustard	plastid	59.92	59.92
Bra018391.1-P	Field mustard	cytosol	59.92	59.92
Bra039755.1-P	Field mustard	mitochondrion	60.69	59.77
VIT_13s0019g02130.t01	Wine grape	peroxisome	61.07	59.7
KRH31026	Soybean	cytosol, mitochondrion, peroxisome, plastid	61.83	59.56
Solyc03g096660.1.1	Tomato	extracellular	44.27	59.49
KRH31025	Soybean	plastid	62.6	59.21
Os03t0269000-01	Rice	plastid	48.09	59.15
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	59.16	58.94
Bra018402.1-P	Field mustard	cytosol	49.24	58.9
KRG97856	Soybean	mitochondrion, plastid	61.07	58.82
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	58.78	58.78
Bra018405.1-P	Field mustard	cytosol	58.78	58.78
VIT_13s0019g02140.t01	Wine grape	peroxisome	60.69	58.67
Bra039977.1-P	Field mustard	plastid	43.13	58.55
Bra039969.1-P	Field mustard	cytosol	58.4	58.17
KRG97870	Soybean	mitochondrion	54.58	57.2
Bra039976.1-P	Field mustard	cytosol	59.16	57.2
Bra018401.1-P	Field mustard	cytosol	54.96	56.92
OQU92858	Sorghum	cytosol, peroxisome, plastid	63.36	53.9
EES08074	Sorghum	plastid	61.45	53.49
KRG97857	Soybean	mitochondrion	50.38	52.8
Bra039966.1-P	Field mustard	cytosol	58.02	52.78
TraesCS4D01G210700.1	Wheat	plastid	63.36	52.37
VIT_13s0019g02170.t01	Wine grape	mitochondrion, nucleus, peroxisome, plastid	56.87	52.28
Os03t0269100-02	Rice	mitochondrion, plastid	61.45	52.27
KRH31021	Soybean	mitochondrion	59.54	51.49
HORVU4Hr1G060330.1	Barley	mitochondrion	58.4	47.81
Bra027961.1-P	Field mustard	cytosol	52.29	45.21
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	25.95	41.72
OQU91956	Sorghum	extracellular, peroxisome	49.62	40.62
Bra029476.1-P	Field mustard	peroxisome	32.44	33.33
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	32.44	33.07
Bra021324.1-P	Field mustard	cytosol	29.77	26.99
Bra001471.1-P	Field mustard	peroxisome	27.48	24.16
Bra034728.1-P	Field mustard	cytosol	27.1	24.15

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra009159	EnsemblPlants:Bra009159.1	EnsemblPlants:Bra009159.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:M4CY62
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF3	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002544E20
SEG:seg	:	:	:	:	:

Description

AT5G06060 (E=1e-117) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA10:-:15466926..15468259

Molecular Weight (calculated)

28190.4 Da

IEP (calculated)

5.359

GRAVY (calculated)

0.025

Length

262 amino acids

Sequence
(BLAST)

001: MESDKRWSLA GKTALVTGGT RGIGRAIVEE LARFGATVHT CSRNQEELKA CLDDWRSNGL TVSGSVCDAS DRDEREKLMQ QVSSAFSGKL NILVNNVGTN
101: VWKPTVEYTS EDYAKVMSTN FESAFHFSQI AHPLLKASGV GSIVFVSSVA GLVYASAGPI YGATKGALNQ LTRNLACEWA CGNIRTNSVA PWYIQTSFVE
201: PVLENKEFMD AVVNRTPLGR VGEPEEVASL VAFLCLPAAS YITGQVIVAD GGFTVNGFNY VV

Best Arabidopsis Sequence Match ( AT5G06060.1 )
(BLAST)

001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP

Arabidopsis Description

Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.