Factsheet for Bra018404.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018402.1-P	Field mustard	cytosol	96.24	81.74
Bra018405.1-P	Field mustard	cytosol	98.39	69.85
Bra018401.1-P	Field mustard	cytosol	90.32	66.4
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	84.41	59.92
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	83.87	59.54
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	83.87	59.54
Bra039977.1-P	Field mustard	plastid	61.29	59.07
CDY40186	Canola	cytosol	65.59	58.94
Bra039967.1-P	Field mustard	plastid	82.8	58.78
Bra039973.1-P	Field mustard	plastid	82.8	58.78
Bra039513.1-P	Field mustard	peroxisome	81.72	58.02
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	81.72	58.02
Bra000477.1-P	Field mustard	plastid	81.72	58.02
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	77.96	55.34
Bra018391.1-P	Field mustard	cytosol	76.34	54.2
Bra018396.1-P	Field mustard	cytosol	74.73	53.05
Bra018393.1-P	Field mustard	cytosol	74.73	53.05
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	74.73	52.85
Bra039969.1-P	Field mustard	cytosol	74.19	52.47
Bra039966.1-P	Field mustard	cytosol	80.11	51.74
Bra015580.1-P	Field mustard	mitochondrion	73.12	51.13
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	70.97	50.38
Bra031575.1-P	Field mustard	plastid	68.28	48.47
VIT_06s0004g05450.t01	Wine grape	plasma membrane	46.24	47.78
Bra039755.1-P	Field mustard	mitochondrion	68.28	47.74
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	61.29	45.24
Bra028744.1-P	Field mustard	cytosol	63.44	44.87
VIT_06s0004g05370.t01	Wine grape	peroxisome	60.75	44.84
VIT_06s0004g05330.t01	Wine grape	peroxisome	60.75	44.49
Bra039976.1-P	Field mustard	cytosol	62.9	43.17
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	60.75	43.13
Bra027961.1-P	Field mustard	cytosol	68.82	42.24
KRH24731	Soybean	nucleus	59.68	41.57
VIT_06s0004g05380.t01	Wine grape	plastid	60.22	41.48
KRH24733	Soybean	nucleus	58.6	41.13
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	58.6	40.37
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	56.45	39.03
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.92	36.99
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	47.31	36.67
Bra027962.1-P	Field mustard	cytosol	32.26	34.68
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	22.58	25.77
KRH29740	Soybean	cytosol	12.9	24.49
Bra029476.1-P	Field mustard	peroxisome	30.11	21.96
VIT_06s0004g05400.t01	Wine grape	cytosol	12.37	20.72
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	28.49	20.62
Bra021324.1-P	Field mustard	cytosol	31.72	20.42
VIT_06s0004g05310.t01	Wine grape	cytosol	11.83	19.47
Bra034728.1-P	Field mustard	cytosol	27.96	17.69
Bra001471.1-P	Field mustard	peroxisome	27.96	17.45
Solyc03g096650.1.1	Tomato	cytosol	7.53	15.73
GSMUA_Achr5P04570_001	Banana	cytosol	7.53	11.02
VIT_06s0004g05440.t01	Wine grape	cytosol	4.84	10.98

Protein Annotations

EnsemblPlants:Bra018404.1	EnsemblPlants:Bra018404.1-P	EnsemblPlantsGene:Bra018404	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
UniParc:UPI0002547D77	UniProt:M4DPG3	MapMan:50.1.1	:	:	:

Description

AT2G29320 (E=7e-085) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA05:-:7997712..7998521

Molecular Weight (calculated)

19914.6 Da

IEP (calculated)

5.146

GRAVY (calculated)

0.135

Length

186 amino acids

Sequence
(BLAST)

001: MQTVSSLFNG KLDIFVNNVG GGRLKPTTEY DADDFDFHIA TNLEPAFHFC QLSHPLLKAS GYGSIIFISS VAGVVSFECG SIYSLAKGAL NQLARNLACE
101: WAKDGIRANA VAPNAIKTPL SQPYLDDVSF KEEFFGRTPL GRAGEPNEVA SLVVFLCLPA ASYITGQTIC VDGGLTVNGF SYQPHA

Best Arabidopsis Sequence Match ( AT2G29310.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.