Factsheet for Bra039969.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31770	Canola	plastid	82.89	93.97
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	93.16	93.16
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	86.69	87.02
Bra018393.1-P	Field mustard	cytosol	84.79	85.11
Bra018396.1-P	Field mustard	cytosol	84.03	84.35
Bra018391.1-P	Field mustard	cytosol	82.89	83.21
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	77.95	78.24
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	77.57	77.86
Bra039967.1-P	Field mustard	plastid	77.19	77.48
Bra039973.1-P	Field mustard	plastid	76.81	77.1
Bra000477.1-P	Field mustard	plastid	76.43	76.72
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	76.43	76.72
Bra018405.1-P	Field mustard	cytosol	76.43	76.72
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	76.05	76.34
Bra039513.1-P	Field mustard	peroxisome	75.29	75.57
Bra018401.1-P	Field mustard	cytosol	72.24	75.1
Bra018402.1-P	Field mustard	cytosol	61.98	74.43
Bra018404.1-P	Field mustard	cytosol	52.47	74.19
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	71.48	71.76
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	67.3	67.56
Bra031575.1-P	Field mustard	plastid	66.92	67.18
Bra039966.1-P	Field mustard	cytosol	73.0	66.67
Bra015580.1-P	Field mustard	mitochondrion	66.54	65.79
Bra039755.1-P	Field mustard	mitochondrion	66.16	65.41
Bra027962.1-P	Field mustard	cytosol	41.83	63.58
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	60.46	63.1
VIT_06s0004g05400.t01	Wine grape	cytosol	26.24	62.16
VIT_06s0004g05380.t01	Wine grape	plastid	62.74	61.11
Solyc03g096650.1.1	Tomato	cytosol	20.53	60.67
Bra039976.1-P	Field mustard	cytosol	62.36	60.52
VIT_06s0004g05370.t01	Wine grape	peroxisome	57.79	60.32
VIT_06s0004g05310.t01	Wine grape	cytosol	25.86	60.18
VIT_06s0004g05330.t01	Wine grape	peroxisome	57.79	59.84
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.22	59.63
Bra039977.1-P	Field mustard	plastid	43.35	59.07
KRH24731	Soybean	nucleus	59.7	58.8
Bra028744.1-P	Field mustard	cytosol	58.56	58.56
VIT_06s0004g05440.t01	Wine grape	cytosol	18.25	58.54
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	58.17	58.4
KRH24733	Soybean	nucleus	58.17	57.74
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	57.41	56.13
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	49.81	54.58
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	49.43	52.85
VIT_06s0004g05450.t01	Wine grape	plasma membrane	35.36	51.67
Bra027961.1-P	Field mustard	cytosol	58.94	51.16
KRH29740	Soybean	cytosol	17.87	47.96
GSMUA_Achr5P04570_001	Banana	cytosol	22.05	45.67
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	28.14	45.4
Bra029476.1-P	Field mustard	peroxisome	31.18	32.16
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	29.28	29.96
Bra021324.1-P	Field mustard	cytosol	28.14	25.61
Bra034728.1-P	Field mustard	cytosol	26.24	23.47
Bra001471.1-P	Field mustard	peroxisome	25.1	22.15

Protein Annotations

EnsemblPlants:Bra039969.1	EnsemblPlants:Bra039969.1-P	EnsemblPlantsGene:Bra039969	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002544230	UniProt:M4FFU5	MapMan:50.1.1	:	:

Description

AT2G30670 (E=7e-115) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA04:-:13132975..13134491

Molecular Weight (calculated)

28169.6 Da

IEP (calculated)

6.012

GRAVY (calculated)

0.086

Length

263 amino acids

Sequence
(BLAST)

001: MDNRWSLEGM TALVTGGASG IGHAIVEELA SFGARIHVFD ISETLLNQSL SEWEKKGFQV SGSICDVSSR PERETLMQTV SAIFDGKLSI LVNNVAVVHT
101: KPTTEYDAND FSFQISTNLE SAYHLSQLSH PLLKASGFGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRINSVAPN FVNKTTMAKP
201: FFKDADYEKS LLNRTPLGRA GEPNEVASLV AFLCLPAASY ITGQTICVDG GLTVNGFSYQ PKA

Best Arabidopsis Sequence Match ( AT2G30670.1 )
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.