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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 87.4 87.07
Bra039969.1-P Field mustard cytosol 87.02 86.69
Bra018393.1-P Field mustard cytosol 85.88 85.88
Bra039974.1-P Field mustard cytosol, plasma membrane, plastid 85.5 85.17
CDY31774 Canola cytosol 76.34 85.11
CDY45441 Canola cytosol 72.52 84.82
CDX97895 Canola cytosol 75.95 84.68
CDY40165 Canola plastid 83.59 83.59
CDY45438 Canola cytosol 83.21 83.21
Bra018396.1-P Field mustard cytosol 83.21 83.21
CDY40179 Canola cytosol, peroxisome, plastid 82.82 83.14
CDY31770 Canola plastid 71.76 81.03
AT2G29330.1 Thale cress cytosol, peroxisome, plastid 80.15 80.77
AT2G29310.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 77.1 77.1
AT2G29320.1 Thale cress mitochondrion 79.01 76.95
CDY40177 Canola cytosol 75.19 71.12
AT2G29300.2 Thale cress extracellular 75.95 69.58
AT1G07450.1 Thale cress cytosol, nucleus, peroxisome 67.94 68.46
AT1G07440.1 Thale cress mitochondrion 68.7 67.67
AT2G29340.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 76.72 65.47
AT2G29360.1 Thale cress cytosol 65.27 63.1
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 60.69 63.1
VIT_06s0004g05400.t01 Wine grape cytosol 26.72 63.06
Solyc03g096650.1.1 Tomato cytosol 21.37 62.92
AT2G29290.2 Thale cress plastid 62.6 62.6
KRH24731 Soybean nucleus 63.74 62.55
AT2G29350.1 Thale cress plastid 64.12 62.45
VIT_06s0004g05370.t01 Wine grape peroxisome 59.92 62.3
VIT_06s0004g05310.t01 Wine grape cytosol 26.72 61.95
AT2G29370.1 Thale cress peroxisome 62.98 61.57
VIT_06s0004g05380.t01 Wine grape plastid 62.98 61.11
VIT_06s0004g05440.t01 Wine grape cytosol 19.08 60.98
AT2G29150.1 Thale cress peroxisome 62.21 60.82
KRH24733 Soybean nucleus 60.69 60.0
VIT_06s0004g05330.t01 Wine grape peroxisome 58.02 59.84
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 61.45 59.63
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 61.07 59.48
AT5G06060.1 Thale cress peroxisome 58.4 57.95
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 51.53 56.25
AT2G29170.1 Thale cress cytosol 22.52 55.14
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 50.0 53.25
VIT_06s0004g05450.t01 Wine grape plasma membrane 34.73 50.56
KRH29740 Soybean cytosol 18.7 50.0
AT2G29260.1 Thale cress plastid 57.63 46.89
GSMUA_Achr5P04570_001 Banana cytosol 22.14 45.67
AT4G05530.1 Thale cress peroxisome 30.15 31.1
AT3G05260.1 Thale cress cytosol 27.48 24.91
AT3G12800.1 Thale cress peroxisome 25.95 22.82
AT2G07640.1 Thale cress mitochondrion 13.36 22.44
AT1G54870.2 Thale cress plastid 27.86 21.66
AT1G36580.1 Thale cress nucleus 13.74 18.46
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1EntrezGene:817617ProteinID:AAC02738.1ProteinID:AEC08425.1ArrayExpress:AT2G30670
EnsemblPlantsGene:AT2G30670RefSeq:AT2G30670TAIR:AT2G30670RefSeq:AT2G30670-TAIR-GEnsemblPlants:AT2G30670.1TAIR:AT2G30670.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114InterPro:NAD(P)-bd_dom_sfRefSeq:NP_180625.1UniProt:O49332PFAM:PF13561PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0001054PO:PO:0001078PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009009PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020100PO:PO:0025022PO:PO:0025281PRINTS:PR00080
PRINTS:PR00081PANTHER:PTHR42898PANTHER:PTHR42898:SF7InterPro:SDR_famSUPFAM:SSF51735UniParc:UPI00000485C6
SEG:seg:::::
Description
Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
Coordinates
chr2:-:13069091..13070920
Molecular Weight (calculated)
28027.5 Da
IEP (calculated)
5.304
GRAVY (calculated)
0.127
Length
262 amino acids
Sequence
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.