CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45438	Canola	cytosol	96.93	96.56
CDY45441	Canola	cytosol	76.25	88.84
CDY40165	Canola	plastid	88.89	88.55
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	85.06	84.41
CDY40175	Canola	plasma membrane	83.91	83.59
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	83.14	82.82
CDY31774	Canola	cytosol	73.56	81.7
CDX97895	Canola	cytosol	73.18	81.28
CDY40171	Canola	cytosol	67.82	80.09
CDY31772	Canola	cytosol, peroxisome, plastid	79.31	79.01
CDY45434	Canola	cytosol, nucleus, plastid	78.93	78.63
CDY31770	Canola	plastid	69.35	78.02
CDY45432	Canola	cytosol	78.16	77.86
CDY40183	Canola	plastid	78.16	77.86
CDY40188	Canola	cytosol, peroxisome, plasma membrane	77.78	77.48
CDY31768	Canola	cytosol, peroxisome, plastid	77.39	77.1
CDY40177	Canola	cytosol	81.61	76.9
CDY31773	Canola	plastid	77.01	76.72
CDX83306	Canola	plastid	76.63	76.34
CDX97899	Canola	peroxisome	76.63	76.34
CDX97897	Canola	cytosol, extracellular	67.05	75.76
CDX95753	Canola	cytosol, peroxisome, plastid	75.86	75.57
CDY40186	Canola	cytosol	59.77	75.36
CDX83307	Canola	peroxisome	75.1	74.81
CDY40185	Canola	plastid	73.95	73.66
CDX95751	Canola	peroxisome	73.95	73.66
CDY40182	Canola	cytosol, peroxisome, plastid	71.65	71.37
CDY45433	Canola	cytosol	66.67	71.02
CDY45435	Canola	cytosol, peroxisome, plastid	71.26	70.99
CDX86486	Canola	cytosol, peroxisome, plastid	70.88	70.61
CDY09917	Canola	cytosol	69.73	69.47
CDY06260	Canola	plastid	69.35	69.08
CDY68057	Canola	cytosol	68.97	68.7
CDX95752	Canola	cytosol	62.07	68.07
CDY06706	Canola	mitochondrion	69.35	68.05
CDY10276	Canola	mitochondrion	68.97	67.67
CDY14610	Canola	mitochondrion	68.97	67.67
CDX86485	Canola	cytosol, peroxisome, plastid	67.82	67.56
CDY16437	Canola	mitochondrion	67.43	66.17
CDY64214	Canola	mitochondrion	42.91	65.5
CDY52942	Canola	mitochondrion	66.67	65.41
Solyc03g096650.1.1	Tomato	cytosol	21.46	62.92
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	60.15	62.3
VIT_06s0004g05400.t01	Wine grape	cytosol	26.44	62.16
VIT_06s0004g05370.t01	Wine grape	peroxisome	59.39	61.51
VIT_06s0004g05440.t01	Wine grape	cytosol	19.16	60.98
CDY31776	Canola	cytosol, peroxisome, plastid	63.22	60.89
VIT_06s0004g05380.t01	Wine grape	plastid	62.84	60.74
CDY09824	Canola	mitochondrion	62.84	60.52
CDY09823	Canola	peroxisome	62.84	60.52
CDX97893	Canola	mitochondrion	62.84	60.52
VIT_06s0004g05310.t01	Wine grape	cytosol	26.05	60.18
CDY04977	Canola	peroxisome	60.15	59.7
CDX98899	Canola	peroxisome	59.77	59.54
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.3	59.26
KRH24731	Soybean	nucleus	60.54	59.18
CDX70101	Canola	peroxisome	59.39	59.16
CDY16436	Canola	endoplasmic reticulum, vacuole	23.75	59.05
CDY14094	Canola	peroxisome	59.39	58.94
CDY04975	Canola	mitochondrion	25.29	58.93
VIT_06s0004g05330.t01	Wine grape	peroxisome	56.7	58.27
CDX95750	Canola	cytosol	60.54	57.66
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.39	57.62
KRH24733	Soybean	nucleus	58.24	57.36
CDY51372	Canola	plastid	60.54	56.63
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	51.72	56.25
CDY72061	Canola	cytosol	23.37	55.96
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	49.81	52.85
CDY35991	Canola	plastid	24.9	52.42
VIT_06s0004g05450.t01	Wine grape	plasma membrane	34.87	50.56
KRH29740	Soybean	cytosol	18.01	47.96
CDX98898	Canola	cytosol, peroxisome, plasma membrane	55.56	46.77
CDX97890	Canola	cytosol	60.54	46.61
GSMUA_Achr5P04570_001	Banana	cytosol	22.22	45.67
CDY65683	Canola	cytosol, mitochondrion	67.82	44.36
CDY35231	Canola	peroxisome	15.71	33.06
CDY31767	Canola	plastid	70.88	32.86
CDY16690	Canola	peroxisome	29.12	29.8
CDX94534	Canola	peroxisome	29.12	29.8
CDY50145	Canola	plastid	78.16	28.18
CDX76382	Canola	cytosol, mitochondrion, peroxisome	27.59	28.02
CDY27447	Canola	cytosol, mitochondrion, peroxisome	27.59	27.91
CDY43488	Canola	cytosol	28.35	25.61
CDY27781	Canola	cytosol, peroxisome, plastid	27.59	24.91
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	27.2	24.74
CDY05152	Canola	cytosol	21.07	23.01
CDY08402	Canola	cytosol	24.52	21.77
CDY00799	Canola	peroxisome	24.14	21.14
CDX73802	Canola	peroxisome	24.14	21.14
CDY05153	Canola	cytosol, nucleus, plastid	4.98	18.57

Protein Annotations

EnsemblPlants:CDY40179	EnsemblPlantsGene:GSBRNA2T00069314001	Gene3D:3.40.50.720	GO:A0A078HSB2	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00081	ProteinID:CDY40179	ProteinID:CDY40179.1
SUPFAM:SSF51735	UniParc:UPI0004EE68D6	UniProt:A0A078HSB2	MapMan:50.1.1	:	:

Description

BnaC04g14070DBnaC04g14070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSB2]

Coordinates

chrLK032465:+:184678..186205

Molecular Weight (calculated)

27794.5 Da

IEP (calculated)

6.992

GRAVY (calculated)

0.151

Length

261 amino acids

Sequence
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA SFGAIIHVCD ISETLLNKSL SEWEKKGFQV SGSICDVSSR PQRETLMQTV SKMFDGKLSI LVNNVVGIRL
101: KPTTEYGADD FSFHISTNLE SAYHLSQLSH PLLKASGFGS IVLNSSVGGV VSMECGSLYG LSKGAMNQLA RSLACEWATD GIRTNSVAPN FILTDMTAPV
201: LVDACYRKSL FSRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYPK P

Best Arabidopsis Sequence Match ( AT2G29300.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.