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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, mitochondrion

Predictor Summary:
  • cytosol 3
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64214 Canola mitochondrion 40.35 94.15
CDY16437 Canola mitochondrion 59.4 89.1
CDY52942 Canola mitochondrion 58.4 87.59
CDY14610 Canola mitochondrion 53.13 79.7
CDY10276 Canola mitochondrion 53.13 79.7
CDY06706 Canola mitochondrion 52.88 79.32
CDY16436 Canola endoplasmic reticulum, vacuole 20.05 76.19
Bra027961.1-P Field mustard cytosol 55.64 73.27
CDX86486 Canola cytosol, peroxisome, plastid 46.87 71.37
CDY68057 Canola cytosol 46.87 71.37
CDY40183 Canola plastid 45.86 69.85
CDY45434 Canola cytosol, nucleus, plastid 45.86 69.85
CDX86485 Canola cytosol, peroxisome, plastid 45.61 69.47
CDY09917 Canola cytosol 45.61 69.47
CDY45438 Canola cytosol 45.36 69.08
CDY40188 Canola cytosol, peroxisome, plasma membrane 45.11 68.7
CDY45432 Canola cytosol 44.86 68.32
CDY06260 Canola plastid 44.86 68.32
VIT_06s0004g05440.t01 Wine grape cytosol 14.04 68.29
CDY40165 Canola plastid 44.61 67.94
CDY45441 Canola cytosol 38.1 67.86
CDY40179 Canola cytosol, peroxisome, plastid 44.36 67.82
CDY31772 Canola cytosol, peroxisome, plastid 44.11 67.18
CDY31768 Canola cytosol, peroxisome, plastid 44.11 67.18
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 44.11 66.92
CDY31774 Canola cytosol 39.35 66.81
CDY45435 Canola cytosol, peroxisome, plastid 43.86 66.79
CDY40175 Canola plasma membrane 43.86 66.79
CDY40185 Canola plastid 43.86 66.79
CDX97899 Canola peroxisome 43.86 66.79
CDY40186 Canola cytosol 34.59 66.67
CDX83307 Canola peroxisome 43.61 66.41
CDX97895 Canola cytosol 39.1 66.38
CDY31773 Canola plastid 43.36 66.03
CDY40182 Canola cytosol, peroxisome, plastid 43.36 66.03
VIT_06s0004g05400.t01 Wine grape cytosol 18.3 65.77
CDX83306 Canola plastid 43.11 65.65
CDX95751 Canola peroxisome 43.11 65.65
VIT_06s0004g05310.t01 Wine grape cytosol 18.55 65.49
CDY40171 Canola cytosol 36.09 65.16
CDX97897 Canola cytosol, extracellular 37.59 64.94
CDX95753 Canola cytosol, peroxisome, plastid 42.36 64.5
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 40.6 64.29
CDY45433 Canola cytosol 39.35 64.08
CDY09824 Canola mitochondrion 42.86 63.1
CDY09823 Canola peroxisome 42.86 63.1
CDX97893 Canola mitochondrion 42.86 63.1
CDX98899 Canola peroxisome 41.1 62.6
VIT_06s0004g05380.t01 Wine grape plastid 42.36 62.59
CDY31770 Canola plastid 36.34 62.5
CDY14094 Canola peroxisome 41.1 62.36
CDY31776 Canola cytosol, peroxisome, plastid 42.11 61.99
CDY04977 Canola peroxisome 40.85 61.98
VIT_06s0004g05370.t01 Wine grape peroxisome 39.1 61.9
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 41.85 61.85
CDX70101 Canola peroxisome 40.35 61.45
KRH24731 Soybean nucleus 41.1 61.42
Solyc03g096650.1.1 Tomato cytosol 13.53 60.67
CDY72061 Canola cytosol 16.54 60.55
VIT_06s0004g05330.t01 Wine grape peroxisome 38.35 60.24
CDX95750 Canola cytosol 40.35 58.76
CDY35991 Canola plastid 18.05 58.06
KRH24733 Soybean nucleus 38.35 57.74
CDY51372 Canola plastid 40.1 57.35
CDX95752 Canola cytosol 34.09 57.14
CDY40177 Canola cytosol 39.1 56.32
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 33.83 56.25
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 37.84 56.13
CDY04975 Canola mitochondrion 15.54 55.36
GSMUA_Achr5P04570_001 Banana cytosol 17.54 55.12
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 33.58 54.47
KRH29740 Soybean cytosol 13.03 53.06
VIT_06s0004g05450.t01 Wine grape plasma membrane 23.56 52.22
CDX98898 Canola cytosol, peroxisome, plasma membrane 38.6 49.68
CDX97890 Canola cytosol 40.1 47.2
CDY35231 Canola peroxisome 10.53 33.87
CDY31767 Canola plastid 46.62 33.04
CDY16690 Canola peroxisome 20.3 31.76
CDX94534 Canola peroxisome 20.3 31.76
CDY27447 Canola cytosol, mitochondrion, peroxisome 19.8 30.62
CDX76382 Canola cytosol, mitochondrion, peroxisome 19.55 30.35
CDY43488 Canola cytosol 19.3 26.64
CDY17559 Canola cytoskeleton, nucleus, peroxisome 19.05 26.48
CDY27781 Canola cytosol, peroxisome, plastid 18.3 25.26
CDX73802 Canola peroxisome 18.55 24.83
CDY00799 Canola peroxisome 18.55 24.83
CDY50145 Canola plastid 44.61 24.59
CDY08402 Canola cytosol 18.05 24.49
CDY05153 Canola cytosol, nucleus, plastid 3.76 21.43
CDY05152 Canola cytosol 12.78 21.34
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1GO:A0A078JDI0UniProt:A0A078JDI0EnsemblPlants:CDY65683ProteinID:CDY65683
ProteinID:CDY65683.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00047990001InterPro:NAD(P)-bd_dom_sfPFAM:PF00106PFAM:PF13561PIRSF:PIRSF000126
PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF7InterPro:SDR_fam
SUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSUniParc:UPI0004EEC50ASEG:seg::
Description
BnaCnng48230DBnaCnng48230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDI0]
Coordinates
chrLK034895:+:12619..21241
Molecular Weight (calculated)
42744.9 Da
IEP (calculated)
6.632
GRAVY (calculated)
0.066
Length
399 amino acids
Sequence
(BLAST)
001: MAGEDQRRRW SLQGKTALVT GGTKGIGHAI VEELAGFGAI IHTCARDEAH LNECLSDWKN KGFQVTGSVC DASSWTEREK LMQTVSTLFD AKLSILINNV
101: GAIRSKPTIE NTAEDFSFHI STNLESAYHF SQLAHPLLKS SGCGNIVFIS SVAGVVSFGI SSIYCATKGF GAIIHTCARD EAHLNECLSD WKKKGFQVTG
201: SVCDASSWTE REKLMQTVST LFDAKLSILI NNVGAIRSKP TIENTAEDFS FHISTNLESA YHFSQLAHPL LKSSGCGSIV FISSVTGVVS CGVSSIYSAT
301: KGAMNQLARN LACEWASDGI RAIAIAPAVI ATPLVEYGFD DEFKKAMEST NPLGRLGKPE EVASLVAFLC MPAASYITGQ TICVDGGLSV KGFSYQPHA
Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.