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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra039755.1-P Field mustard mitochondrion 97.37 97.37
CDY16437 Canola mitochondrion 97.37 97.37
CDY64214 Canola mitochondrion 57.52 89.47
CDY16436 Canola endoplasmic reticulum, vacuole 34.21 86.67
CDY14610 Canola mitochondrion 78.2 78.2
CDY10276 Canola mitochondrion 78.2 78.2
CDY06706 Canola mitochondrion 77.82 77.82
CDX86486 Canola cytosol, peroxisome, plastid 69.55 70.61
CDY68057 Canola cytosol 69.55 70.61
CDY31768 Canola cytosol, peroxisome, plastid 67.67 68.7
CDY40183 Canola plastid 67.29 68.32
CDX86485 Canola cytosol, peroxisome, plastid 67.29 68.32
CDY45441 Canola cytosol 57.52 68.3
VIT_06s0004g05440.t01 Wine grape cytosol 21.05 68.29
CDY45438 Canola cytosol 66.92 67.94
CDY40188 Canola cytosol, peroxisome, plasma membrane 66.92 67.94
CDY09917 Canola cytosol 66.92 67.94
CDY45434 Canola cytosol, nucleus, plastid 66.54 67.56
CDY31772 Canola cytosol, peroxisome, plastid 66.17 67.18
CDY40165 Canola plastid 66.17 67.18
CDY06260 Canola plastid 66.17 67.18
CDY45432 Canola cytosol 65.79 66.79
CDX97899 Canola peroxisome 65.79 66.79
CDY40179 Canola cytosol, peroxisome, plastid 65.41 66.67
CDY31773 Canola plastid 65.41 66.41
CDY31774 Canola cytosol 58.65 66.38
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 62.78 66.27
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 65.41 66.16
CDY40175 Canola plasma membrane 65.04 66.03
CDX97895 Canola cytosol 58.27 65.96
VIT_06s0004g05400.t01 Wine grape cytosol 27.44 65.77
CDY40186 Canola cytosol 51.13 65.7
CDX83307 Canola peroxisome 64.66 65.65
VIT_06s0004g05310.t01 Wine grape cytosol 27.82 65.49
CDX97897 Canola cytosol, extracellular 56.77 65.37
CDX95751 Canola peroxisome 63.91 64.89
CDY40171 Canola cytosol 53.76 64.71
CDY45435 Canola cytosol, peroxisome, plastid 63.53 64.5
CDY40182 Canola cytosol, peroxisome, plastid 63.16 64.12
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 65.04 64.07
VIT_06s0004g05380.t01 Wine grape plastid 65.04 64.07
CDY40185 Canola plastid 62.78 63.74
CDY09824 Canola mitochondrion 64.66 63.47
CDY09823 Canola peroxisome 64.66 63.47
CDX97893 Canola mitochondrion 64.66 63.47
CDX83306 Canola plastid 62.41 63.36
VIT_06s0004g05370.t01 Wine grape peroxisome 59.77 63.1
CDX98899 Canola peroxisome 62.03 62.98
CDY14094 Canola peroxisome 62.03 62.74
CDY04977 Canola peroxisome 62.03 62.74
CDX95753 Canola cytosol, peroxisome, plastid 61.65 62.6
KRH24731 Soybean nucleus 62.78 62.55
CDY31770 Canola plastid 54.51 62.5
CDY31776 Canola cytosol, peroxisome, plastid 63.53 62.36
CDX70101 Canola peroxisome 60.9 61.83
VIT_06s0004g05330.t01 Wine grape peroxisome 59.02 61.81
CDY45433 Canola cytosol 56.77 61.63
CDX95750 Canola cytosol 63.16 61.31
Solyc03g096650.1.1 Tomato cytosol 20.3 60.67
CDY04975 Canola mitochondrion 24.81 58.93
KRH24733 Soybean nucleus 58.65 58.87
CDY51372 Canola plastid 61.65 58.78
CDY65683 Canola cytosol, mitochondrion 87.59 58.4
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 58.65 57.99
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 51.88 57.5
CDY35991 Canola plastid 26.69 57.26
CDY72061 Canola cytosol 23.31 56.88
CDX95752 Canola cytosol 50.38 56.3
CDY40177 Canola cytosol 57.89 55.6
GSMUA_Achr5P04570_001 Banana cytosol 26.32 55.12
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 50.75 54.88
VIT_06s0004g05450.t01 Wine grape plasma membrane 36.47 53.89
KRH29740 Soybean cytosol 19.55 53.06
CDX98898 Canola cytosol, peroxisome, plasma membrane 57.89 49.68
CDX97890 Canola cytosol 61.65 48.38
CDY35231 Canola peroxisome 16.17 34.68
CDY16690 Canola peroxisome 31.58 32.94
CDX94534 Canola peroxisome 31.2 32.55
CDY31767 Canola plastid 68.8 32.5
CDY27447 Canola cytosol, mitochondrion, peroxisome 29.32 30.23
CDX76382 Canola cytosol, mitochondrion, peroxisome 28.95 29.96
CDY43488 Canola cytosol 29.32 26.99
CDY17559 Canola cytoskeleton, nucleus, peroxisome 28.57 26.48
CDY27781 Canola cytosol, peroxisome, plastid 28.57 26.3
CDY50145 Canola plastid 68.42 25.14
CDY00799 Canola peroxisome 26.69 23.83
CDX73802 Canola peroxisome 26.69 23.83
CDY08402 Canola cytosol 25.94 23.47
CDY05152 Canola cytosol 20.3 22.59
CDY05153 Canola cytosol, nucleus, plastid 5.64 21.43
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1GO:A0A078ISI0UniProt:A0A078ISI0EnsemblPlants:CDY52942ProteinID:CDY52942
ProteinID:CDY52942.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00008133001InterPro:NAD(P)-bd_dom_sfPFAM:PF13561PRINTS:PR00080PRINTS:PR00081
ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF7InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CS
UniParc:UPI0004EDD3C1SEG:seg::::
Description
BnaCnng23860DBnaCnng23860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISI0]
Coordinates
chrLK033144:+:47604..50834
Molecular Weight (calculated)
28485.8 Da
IEP (calculated)
6.388
GRAVY (calculated)
0.024
Length
266 amino acids
Sequence
(BLAST)
001: MAGEGQRRRW SLQGKTALVT GGTKGIGHAI VEELAGFGVT IHTCARDDAH LNECLSKWKN KGFQVTGSVC DVSSWTEREK LMQTVYSLFD AKLSILINNA
101: GAIRSKPTIE HTAEDFSFHI STNLESAYHF SQLAHPLLKA SGCGNIVFIS SVSGVVSLSI SSIYSATKGA MNQLARNLAC EWASDSIRAN SVAPTFIATP
201: LVDNAFEDEF KEVVESTNPL GRIGKPEEVA SVVAFLCMPA ASYITGQTIC VDGGLSVNGF SYQPQA
Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.