Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT1G07450.1 | CDX83307 | AT2G29320.1 | 21798944 |
AT1G07450.1 | CDX95751 | AT2G29320.1 | 21798944 |
AT1G07450.1 | CDX97890 | AT2G29350.1 | 21798944 |
AT1G07450.1 | CDY51372 | AT2G29350.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY06260 | Canola | plastid | 97.33 | 97.33 |
AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 83.97 | 84.62 |
CDY68057 | Canola | cytosol | 79.39 | 79.39 |
CDX86486 | Canola | cytosol, peroxisome, plastid | 79.01 | 79.01 |
CDX86485 | Canola | cytosol, peroxisome, plastid | 76.72 | 76.72 |
CDX83306 | Canola | plastid | 71.76 | 71.76 |
CDY40186 | Canola | cytosol | 56.49 | 71.5 |
CDX95753 | Canola | cytosol, peroxisome, plastid | 70.99 | 70.99 |
CDY31773 | Canola | plastid | 70.61 | 70.61 |
CDY31768 | Canola | cytosol, peroxisome, plastid | 70.23 | 70.23 |
CDY45432 | Canola | cytosol | 69.85 | 69.85 |
CDY40179 | Canola | cytosol, peroxisome, plastid | 69.47 | 69.73 |
CDY45438 | Canola | cytosol | 69.47 | 69.47 |
CDY31772 | Canola | cytosol, peroxisome, plastid | 69.08 | 69.08 |
CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 69.08 | 69.08 |
CDX83307 | Canola | peroxisome | 69.08 | 69.08 |
CDY45441 | Canola | cytosol | 58.78 | 68.75 |
CDX97899 | Canola | peroxisome | 68.32 | 68.32 |
CDY40165 | Canola | plastid | 68.32 | 68.32 |
CDX95751 | Canola | peroxisome | 68.32 | 68.32 |
CDY45435 | Canola | cytosol, peroxisome, plastid | 67.94 | 67.94 |
CDY40182 | Canola | cytosol, peroxisome, plastid | 67.94 | 67.94 |
CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 67.94 | 67.68 |
CDY40183 | Canola | plastid | 67.56 | 67.56 |
CDY45434 | Canola | cytosol, nucleus, plastid | 67.56 | 67.56 |
CDX97897 | Canola | cytosol, extracellular | 59.54 | 67.53 |
CDY06706 | Canola | mitochondrion | 68.32 | 67.29 |
CDY52942 | Canola | mitochondrion | 67.94 | 66.92 |
CDY10276 | Canola | mitochondrion | 67.94 | 66.92 |
CDY14610 | Canola | mitochondrion | 67.94 | 66.92 |
CDY31774 | Canola | cytosol | 59.92 | 66.81 |
CDY16437 | Canola | mitochondrion | 67.56 | 66.54 |
CDY40185 | Canola | plastid | 66.41 | 66.41 |
CDY40175 | Canola | plasma membrane | 66.41 | 66.41 |
CDX98899 | Canola | peroxisome | 66.41 | 66.41 |
CDX97895 | Canola | cytosol | 59.54 | 66.38 |
VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 63.36 | 65.87 |
VIT_06s0004g05400.t01 | Wine grape | cytosol | 27.86 | 65.77 |
CDY04977 | Canola | peroxisome | 65.65 | 65.4 |
CDY64214 | Canola | mitochondrion | 42.37 | 64.91 |
CDY14094 | Canola | peroxisome | 64.89 | 64.64 |
VIT_06s0004g05310.t01 | Wine grape | cytosol | 27.86 | 64.6 |
CDY45433 | Canola | cytosol | 60.31 | 64.49 |
Solyc03g096650.1.1 | Tomato | cytosol | 21.76 | 64.04 |
CDY09823 | Canola | peroxisome | 66.03 | 63.84 |
CDY09824 | Canola | mitochondrion | 65.65 | 63.47 |
CDY31776 | Canola | cytosol, peroxisome, plastid | 65.65 | 63.47 |
CDX97893 | Canola | mitochondrion | 65.65 | 63.47 |
VIT_06s0004g05440.t01 | Wine grape | cytosol | 19.85 | 63.41 |
CDY04975 | Canola | mitochondrion | 27.1 | 63.39 |
CDX70101 | Canola | peroxisome | 63.36 | 63.36 |
CDY31770 | Canola | plastid | 55.34 | 62.5 |
CDY40171 | Canola | cytosol | 52.67 | 62.44 |
CDY72061 | Canola | cytosol | 25.95 | 62.39 |
VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.92 | 62.3 |
VIT_06s0004g05380.t01 | Wine grape | plastid | 64.12 | 62.22 |
CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.81 | 61.9 |
VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 63.36 | 61.48 |
KRH24731 | Soybean | nucleus | 62.6 | 61.42 |
VIT_06s0004g05330.t01 | Wine grape | peroxisome | 58.4 | 60.24 |
KRH24733 | Soybean | nucleus | 60.69 | 60.0 |
CDX95750 | Canola | cytosol | 62.6 | 59.85 |
CDX95752 | Canola | cytosol | 54.2 | 59.66 |
KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 59.92 | 58.36 |
CDY51372 | Canola | plastid | 61.83 | 58.06 |
CDY40177 | Canola | cytosol | 59.92 | 56.68 |
VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 51.53 | 56.25 |
VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 50.38 | 53.66 |
KRH29740 | Soybean | cytosol | 19.85 | 53.06 |
VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.88 | 52.22 |
CDY35991 | Canola | plastid | 24.43 | 51.61 |
CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 59.54 | 50.32 |
CDX97890 | Canola | cytosol | 62.21 | 48.08 |
GSMUA_Achr5P04570_001 | Banana | cytosol | 22.9 | 47.24 |
CDY65683 | Canola | cytosol, mitochondrion | 69.47 | 45.61 |
CDY35231 | Canola | peroxisome | 16.79 | 35.48 |
CDY31767 | Canola | plastid | 69.85 | 32.5 |
CDY16690 | Canola | peroxisome | 31.3 | 32.16 |
CDX94534 | Canola | peroxisome | 30.92 | 31.76 |
CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 30.15 | 30.74 |
CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 30.15 | 30.62 |
CDY27781 | Canola | cytosol, peroxisome, plastid | 28.63 | 25.95 |
CDY43488 | Canola | cytosol | 28.24 | 25.61 |
CDY50145 | Canola | plastid | 69.85 | 25.28 |
CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 27.1 | 24.74 |
CDY05152 | Canola | cytosol | 22.14 | 24.27 |
CDX73802 | Canola | peroxisome | 25.19 | 22.15 |
CDY00799 | Canola | peroxisome | 25.19 | 22.15 |
CDY08402 | Canola | cytosol | 24.81 | 22.11 |
CDY05153 | Canola | cytosol, nucleus, plastid | 4.2 | 15.71 |
Protein Annotations
Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:A0A078FA34 | UniProt:A0A078FA34 | EnsemblPlants:CDY09917 | ProteinID:CDY09917 |
ProteinID:CDY09917.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00031681001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
ScanProsite:PS00061 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
UniParc:UPI0004EBD8C8 | SEG:seg | : | : | : | : |
Description
BnaC08g45340DBnaC08g45340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FA34]
Coordinates
chrLK032000:+:62486..63706
Molecular Weight (calculated)
28127.7 Da
IEP (calculated)
5.730
GRAVY (calculated)
0.123
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDINMWSLQC MTALVTGGTK GIGYAIVEEL ASFGARVHTC DIDQTLLDEC LSEWQSKGFQ VSGSVCDVTS RPQREQLMQT VSSLFGSKLN ILVNNVGKFM
101: LKPTLESTAE DFSSLMSTNL ESAYHISQLA HPLLKVSGNG SIIFISSVSG IVSGTASVYG ATKGAMNQLG RNLACEWASD GIRVNSVAPW VTATSLVKKY
201: LDDKKFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICVDGG FTVNGFSYKP EA
101: LKPTLESTAE DFSSLMSTNL ESAYHISQLA HPLLKVSGNG SIIFISSVSG IVSGTASVYG ATKGAMNQLG RNLACEWASD GIRVNSVAPW VTATSLVKKY
201: LDDKKFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICVDGG FTVNGFSYKP EA
001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
Arabidopsis Description
Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.