Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018405.1-P | Field mustard | cytosol | 98.47 | 98.47 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 97.33 | 97.33 |
| CDY40186 | Canola | cytosol | 74.81 | 94.69 |
| CDY40185 | Canola | plastid | 88.93 | 88.93 |
| CDY45433 | Canola | cytosol | 80.92 | 86.53 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 84.73 | 84.73 |
| CDY31773 | Canola | plastid | 84.73 | 84.73 |
| CDX83307 | Canola | peroxisome | 84.35 | 84.35 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 83.97 | 83.97 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 83.97 | 83.97 |
| CDX95751 | Canola | peroxisome | 83.59 | 83.59 |
| CDX97897 | Canola | cytosol, extracellular | 73.66 | 83.55 |
| CDX97899 | Canola | peroxisome | 83.21 | 83.21 |
| CDX83306 | Canola | plastid | 83.21 | 83.21 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 82.82 | 82.82 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 82.44 | 82.44 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 79.01 | 79.01 |
| CDY40183 | Canola | plastid | 78.63 | 78.63 |
| CDY45438 | Canola | cytosol | 78.63 | 78.63 |
| CDY40175 | Canola | plasma membrane | 78.24 | 78.24 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 77.86 | 78.16 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 77.86 | 77.57 |
| CDY31774 | Canola | cytosol | 69.08 | 77.02 |
| CDX97895 | Canola | cytosol | 68.7 | 76.6 |
| CDY45441 | Canola | cytosol | 64.89 | 75.89 |
| CDY40165 | Canola | plastid | 75.57 | 75.57 |
| CDY40171 | Canola | cytosol | 62.6 | 74.21 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 72.52 | 72.52 |
| CDY31770 | Canola | plastid | 64.12 | 72.41 |
| CDY68057 | Canola | cytosol | 70.99 | 70.99 |
| CDX95752 | Canola | cytosol | 63.74 | 70.17 |
| CDY09917 | Canola | cytosol | 69.85 | 69.85 |
| CDY06706 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY14610 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY10276 | Canola | mitochondrion | 70.23 | 69.17 |
| CDY06260 | Canola | plastid | 68.32 | 68.32 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 67.94 | 67.94 |
| CDY16437 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY52942 | Canola | mitochondrion | 66.79 | 65.79 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 26.34 | 65.71 |
| CDY40177 | Canola | cytosol | 67.56 | 63.9 |
| CDY64214 | Canola | mitochondrion | 41.22 | 63.16 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 59.92 | 62.3 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.54 | 61.9 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| CDY04975 | Canola | mitochondrion | 26.34 | 61.61 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.95 | 61.26 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 19.08 | 60.98 |
| CDY04977 | Canola | peroxisome | 61.07 | 60.84 |
| CDX98899 | Canola | peroxisome | 60.69 | 60.69 |
| CDY14094 | Canola | peroxisome | 60.31 | 60.08 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.83 | 60.0 |
| CDX70101 | Canola | peroxisome | 59.92 | 59.92 |
| KRH24731 | Soybean | nucleus | 60.69 | 59.55 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 61.45 | 59.41 |
| CDY09824 | Canola | mitochondrion | 61.45 | 59.41 |
| CDY09823 | Canola | peroxisome | 61.45 | 59.41 |
| CDX97893 | Canola | mitochondrion | 61.45 | 59.41 |
| KRH24733 | Soybean | nucleus | 59.92 | 59.25 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 60.69 | 58.89 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 25.19 | 58.41 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 56.49 | 58.27 |
| CDX95750 | Canola | cytosol | 60.69 | 58.03 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 59.16 | 57.62 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 50.76 | 55.42 |
| CDY51372 | Canola | plastid | 58.78 | 55.2 |
| CDY35991 | Canola | plastid | 25.57 | 54.03 |
| CDY72061 | Canola | cytosol | 22.14 | 53.21 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.62 | 52.85 |
| KRH29740 | Soybean | cytosol | 18.7 | 50.0 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 34.35 | 50.0 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 55.73 | 47.1 |
| CDX97890 | Canola | cytosol | 59.92 | 46.31 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 21.76 | 44.88 |
| CDY65683 | Canola | cytosol, mitochondrion | 68.32 | 44.86 |
| CDY35231 | Canola | peroxisome | 16.79 | 35.48 |
| CDY31767 | Canola | plastid | 75.95 | 35.35 |
| CDY16690 | Canola | peroxisome | 30.15 | 30.98 |
| CDX94534 | Canola | peroxisome | 30.15 | 30.98 |
| CDY50145 | Canola | plastid | 85.11 | 30.8 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 28.63 | 29.18 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 28.63 | 29.07 |
| CDY43488 | Canola | cytosol | 29.77 | 26.99 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 28.63 | 26.13 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.63 | 25.95 |
| CDX73802 | Canola | peroxisome | 28.24 | 24.83 |
| CDY00799 | Canola | peroxisome | 28.24 | 24.83 |
| CDY08402 | Canola | cytosol | 27.86 | 24.83 |
| CDY05152 | Canola | cytosol | 22.14 | 24.27 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.96 | 18.57 |
Protein Annotations
| EnsemblPlants:CDY45432 | EnsemblPlantsGene:GSBRNA2T00082043001 | Gene3D:3.40.50.720 | GO:A0A078I5R3 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY45432 |
| ProteinID:CDY45432.1 | SUPFAM:SSF51735 | UniParc:UPI0004EF2E39 | UniProt:A0A078I5R3 | MapMan:50.1.1 | : |
Description
BnaA05g12690DBnaA05g12690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5R3]
Coordinates
chrLK032625:+:17462..18735
Molecular Weight (calculated)
28010.3 Da
IEP (calculated)
5.101
GRAVY (calculated)
0.054
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLEGT TALVTGGGSG IGYAIVEELA GFGAKIHVCD ISETLLNKSL SEWEKKGFKV SGSVCDVTSR PERETLMQTV SSLFNGKLDI FVNNVGGGRL
101: KPTTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IIFISSVAGV VSFECGSIYS LAKGALNQLA RNLACEWAKD GIRANAVAPN AIKTPLSQPY
201: LDDVSFKEEL FGRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQP HA
101: KPTTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IIFISSVAGV VSFECGSIYS LAKGALNQLA RNLACEWAKD GIRANAVAPN AIKTPLSQPY
201: LDDVSFKEEL FGRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICVDGG LTVNGFSYQP HA
001: MDKRWSLKGM TALVTGGASG IGYAIVEELA GFGARIHVCD ISEAKLNQSL SEWEKKGFQV SGSVCDVASR PEREELMQTV SSQFDGKLNI LVSNVGVIRS
101: KPTTEYTEDD FAFHISSNVE AAYHFSQLSH PLLKASGYGS IIFVSSIAGV ISFDAGSIYG LTKGALIQLA KNLACEWAKD GIRANAVAPN VINTPLSQSY
201: LEDVSFKKAL LSRTPLGRVG EPNEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP EEALLSRTSL RRVGEPNEVS SLVVFLCLPA ASYITGQMVK
301: PFVLMEV
101: KPTTEYTEDD FAFHISSNVE AAYHFSQLSH PLLKASGYGS IIFVSSIAGV ISFDAGSIYG LTKGALIQLA KNLACEWAKD GIRANAVAPN VINTPLSQSY
201: LEDVSFKKAL LSRTPLGRVG EPNEVASLVA FLCLPAASYI TGQTICVDGG LTVNGFSYQP EEALLSRTSL RRVGEPNEVS SLVVFLCLPA ASYITGQMVK
301: PFVLMEV
Arabidopsis Description
Tropinone reductase homolog At2g29340 [Source:UniProtKB/Swiss-Prot;Acc:F4IKM1]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
SUBAcon: [endoplasmic reticulum,cytosol,peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.