Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97895 | Canola | cytosol | 99.57 | 99.57 |
| CDY31770 | Canola | plastid | 87.23 | 88.36 |
| Bra039974.1-P | Field mustard | cytosol, plasma membrane, plastid | 98.72 | 88.21 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 93.19 | 83.27 |
| CDY40171 | Canola | cytosol | 74.47 | 79.19 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 85.11 | 76.34 |
| CDY40165 | Canola | plastid | 82.98 | 74.43 |
| CDY45438 | Canola | cytosol | 82.55 | 74.05 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 81.7 | 73.56 |
| CDY40175 | Canola | plasma membrane | 81.28 | 72.9 |
| CDY45441 | Canola | cytosol | 68.09 | 71.43 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 79.15 | 70.99 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 78.72 | 70.61 |
| CDY40183 | Canola | plastid | 78.3 | 70.23 |
| CDX97899 | Canola | peroxisome | 78.3 | 70.23 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 77.87 | 69.85 |
| CDY31773 | Canola | plastid | 77.02 | 69.08 |
| CDY45432 | Canola | cytosol | 77.02 | 69.08 |
| CDX83306 | Canola | plastid | 76.17 | 68.32 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 75.74 | 67.94 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 75.32 | 67.56 |
| CDY40185 | Canola | plastid | 74.89 | 67.18 |
| CDX97897 | Canola | cytosol, extracellular | 65.96 | 67.1 |
| CDX83307 | Canola | peroxisome | 74.47 | 66.79 |
| CDX95751 | Canola | peroxisome | 73.19 | 65.65 |
| CDY40186 | Canola | cytosol | 57.02 | 64.73 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 71.91 | 64.5 |
| CDY64214 | Canola | mitochondrion | 46.81 | 64.33 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 71.06 | 63.74 |
| CDY45433 | Canola | cytosol | 66.38 | 63.67 |
| CDY40177 | Canola | cytosol | 74.89 | 63.54 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 29.36 | 62.16 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 68.09 | 61.07 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 28.94 | 60.18 |
| CDY68057 | Canola | cytosol | 66.81 | 59.92 |
| CDY09917 | Canola | cytosol | 66.81 | 59.92 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 20.85 | 59.76 |
| Solyc03g096650.1.1 | Tomato | cytosol | 22.55 | 59.55 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 66.38 | 59.54 |
| CDY16437 | Canola | mitochondrion | 66.81 | 59.02 |
| CDY06260 | Canola | plastid | 65.53 | 58.78 |
| CDY52942 | Canola | mitochondrion | 66.38 | 58.65 |
| CDY06706 | Canola | mitochondrion | 66.38 | 58.65 |
| CDY14610 | Canola | mitochondrion | 65.96 | 58.27 |
| CDY10276 | Canola | mitochondrion | 65.96 | 58.27 |
| CDX95752 | Canola | cytosol | 57.02 | 56.3 |
| CDY72061 | Canola | cytosol | 25.96 | 55.96 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 60.0 | 55.95 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 62.55 | 54.44 |
| CDY09824 | Canola | mitochondrion | 62.55 | 54.24 |
| CDY09823 | Canola | peroxisome | 62.55 | 54.24 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 62.55 | 54.24 |
| CDX97893 | Canola | mitochondrion | 62.55 | 54.24 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 61.7 | 53.7 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 57.02 | 53.17 |
| KRH24731 | Soybean | nucleus | 60.0 | 52.81 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 57.02 | 52.76 |
| CDY04977 | Canola | peroxisome | 58.3 | 52.09 |
| KRH24733 | Soybean | nucleus | 58.3 | 51.7 |
| CDX98899 | Canola | peroxisome | 57.45 | 51.53 |
| CDY14094 | Canola | peroxisome | 57.45 | 51.33 |
| KRH29740 | Soybean | cytosol | 21.28 | 51.02 |
| CDX70101 | Canola | peroxisome | 56.6 | 50.76 |
| CDX95750 | Canola | cytosol | 58.72 | 50.37 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 56.17 | 49.07 |
| CDY51372 | Canola | plastid | 57.87 | 48.75 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 48.51 | 47.5 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 48.51 | 46.34 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 20.0 | 44.76 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.98 | 42.52 |
| CDY35991 | Canola | plastid | 22.13 | 41.94 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 31.49 | 41.11 |
| CDY04975 | Canola | mitochondrion | 19.57 | 41.07 |
| CDX97890 | Canola | cytosol | 58.72 | 40.71 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 52.34 | 39.68 |
| CDY65683 | Canola | cytosol, mitochondrion | 66.81 | 39.35 |
| CDY31767 | Canola | plastid | 70.21 | 29.31 |
| CDY35231 | Canola | peroxisome | 15.32 | 29.03 |
| CDX94534 | Canola | peroxisome | 30.21 | 27.84 |
| CDY16690 | Canola | peroxisome | 30.21 | 27.84 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.36 | 26.85 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 28.94 | 26.36 |
| CDY50145 | Canola | plastid | 79.15 | 25.69 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 26.81 | 21.8 |
| CDY43488 | Canola | cytosol | 25.96 | 21.11 |
| CDY08402 | Canola | cytosol | 25.96 | 20.75 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 24.68 | 20.21 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.96 | 20.0 |
| CDY00799 | Canola | peroxisome | 25.11 | 19.8 |
| CDX73802 | Canola | peroxisome | 25.11 | 19.8 |
| CDY05152 | Canola | cytosol | 19.57 | 19.25 |
Protein Annotations
| EnsemblPlants:CDY31774 | EnsemblPlantsGene:GSBRNA2T00050431001 | Gene3D:3.40.50.720 | GO:A0A078H2X7 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY31774 |
| ProteinID:CDY31774.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE4D48 | UniProt:A0A078H2X7 | MapMan:50.1.1 |
Description
BnaA04g17100DBnaA04g17100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2X7]
Coordinates
chrLK032278:+:456379..458140
Molecular Weight (calculated)
25227.0 Da
IEP (calculated)
6.232
GRAVY (calculated)
-0.011
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLEGM TALVTGGASG IGHAIVEELA SFGARIHVCD ISETLLNQSL SEWEKKGFQV SGSTCDVSSR PEREILMQTI SGIFDGKLNI LVNNVGVVHT
101: KPTTEYEADD FSFHISTNLE SAYHLSQLSH PLLKASGIGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNKTTMAKP
201: FFKDTGYEKT SYITGQTICV DGGLTVNGFS YQPNA
101: KPTTEYEADD FSFHISTNLE SAYHLSQLSH PLLKASGIGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNKTTMAKP
201: FFKDTGYEKT SYITGQTICV DGGLTVNGFS YQPNA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.