Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018393.1-P | Field mustard | cytosol | 99.11 | 84.73 |
| CDY40165 | Canola | plastid | 90.62 | 77.48 |
| CDY45438 | Canola | cytosol | 90.18 | 77.1 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 88.84 | 76.25 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 84.82 | 72.52 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 83.93 | 71.48 |
| CDY40175 | Canola | plasma membrane | 83.48 | 71.37 |
| CDY40177 | Canola | cytosol | 85.71 | 69.31 |
| CDY31774 | Canola | cytosol | 71.43 | 68.09 |
| CDX97895 | Canola | cytosol | 70.98 | 67.66 |
| CDY40183 | Canola | plastid | 78.57 | 67.18 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 78.57 | 67.18 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 78.12 | 66.79 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 76.34 | 65.27 |
| CDY40171 | Canola | cytosol | 64.29 | 65.16 |
| CDY31770 | Canola | plastid | 67.41 | 65.09 |
| CDY31773 | Canola | plastid | 75.89 | 64.89 |
| CDY45432 | Canola | cytosol | 75.89 | 64.89 |
| CDX97899 | Canola | peroxisome | 75.45 | 64.5 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 75.45 | 64.5 |
| CDX83306 | Canola | plastid | 75.0 | 64.12 |
| CDX95751 | Canola | peroxisome | 74.11 | 63.36 |
| CDX83307 | Canola | peroxisome | 74.11 | 63.36 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 73.66 | 62.98 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 29.02 | 61.9 |
| CDX97897 | Canola | cytosol, extracellular | 63.84 | 61.9 |
| CDY45433 | Canola | cytosol | 67.41 | 61.63 |
| CDY40185 | Canola | plastid | 71.88 | 61.45 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 70.09 | 59.92 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 70.09 | 59.92 |
| CDY04975 | Canola | mitochondrion | 29.91 | 59.82 |
| CDY40186 | Canola | cytosol | 54.91 | 59.42 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 68.75 | 58.78 |
| CDY09917 | Canola | cytosol | 68.75 | 58.78 |
| CDY68057 | Canola | cytosol | 68.3 | 58.4 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 67.86 | 58.02 |
| CDY06260 | Canola | plastid | 67.41 | 57.63 |
| CDY06706 | Canola | mitochondrion | 68.3 | 57.52 |
| CDY52942 | Canola | mitochondrion | 68.3 | 57.52 |
| CDY16437 | Canola | mitochondrion | 67.86 | 57.14 |
| CDY14610 | Canola | mitochondrion | 67.86 | 57.14 |
| CDY10276 | Canola | mitochondrion | 67.86 | 57.14 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 61.16 | 54.37 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 61.16 | 53.94 |
| CDY35991 | Canola | plastid | 29.46 | 53.23 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 59.82 | 53.17 |
| CDX95752 | Canola | cytosol | 55.8 | 52.52 |
| CDX97893 | Canola | mitochondrion | 63.39 | 52.4 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 63.39 | 52.4 |
| CDY09824 | Canola | mitochondrion | 63.39 | 52.4 |
| CDY09823 | Canola | peroxisome | 63.39 | 52.4 |
| CDX98899 | Canola | peroxisome | 60.27 | 51.53 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 41.07 | 51.11 |
| CDY04977 | Canola | peroxisome | 59.82 | 50.95 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.16 | 50.74 |
| CDX70101 | Canola | peroxisome | 58.93 | 50.38 |
| CDY14094 | Canola | peroxisome | 58.93 | 50.19 |
| KRH24731 | Soybean | nucleus | 58.93 | 49.44 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.38 | 49.26 |
| CDY64214 | Canola | mitochondrion | 37.5 | 49.12 |
| CDY51372 | Canola | plastid | 60.71 | 48.75 |
| KRH24733 | Soybean | nucleus | 57.59 | 48.68 |
| CDX95750 | Canola | cytosol | 59.38 | 48.54 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 52.23 | 47.56 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 56.7 | 47.21 |
| KRH29740 | Soybean | cytosol | 20.54 | 46.94 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 49.55 | 46.25 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 20.98 | 42.34 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 20.54 | 40.71 |
| CDX97890 | Canola | cytosol | 61.16 | 40.41 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 54.02 | 39.03 |
| CDY65683 | Canola | cytosol, mitochondrion | 67.86 | 38.1 |
| Solyc03g096650.1.1 | Tomato | cytosol | 14.73 | 37.08 |
| CDY35231 | Canola | peroxisome | 19.2 | 34.68 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 12.05 | 32.93 |
| CDY72061 | Canola | cytosol | 15.62 | 32.11 |
| CDY31767 | Canola | plastid | 75.0 | 29.84 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 15.18 | 26.77 |
| CDY16690 | Canola | peroxisome | 28.57 | 25.1 |
| CDX94534 | Canola | peroxisome | 28.12 | 24.71 |
| CDY50145 | Canola | plastid | 76.34 | 23.62 |
| CDY05152 | Canola | cytosol | 25.0 | 23.43 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 25.45 | 22.18 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 25.45 | 22.09 |
| CDY43488 | Canola | cytosol | 27.23 | 21.11 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 26.34 | 20.42 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 25.89 | 20.21 |
| CDY08402 | Canola | cytosol | 21.88 | 16.67 |
| CDY00799 | Canola | peroxisome | 21.43 | 16.11 |
| CDX73802 | Canola | peroxisome | 21.43 | 16.11 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY45441 | EnsemblPlantsGene:GSBRNA2T00082055001 | Gene3D:3.40.50.720 | GO:A0A078I6C3 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY45441 |
| ProteinID:CDY45441.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEEC47 | UniProt:A0A078I6C3 | MapMan:50.1.1 |
Description
BnaA05g12600DBnaA05g12600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6C3]
Coordinates
chrLK032625:-:75946..77986
Molecular Weight (calculated)
24307.1 Da
IEP (calculated)
6.663
GRAVY (calculated)
-0.006
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MHISETLLNQ RLSEWENKGF QVSGSICDVS SRPERETLMQ TVSKMFDGKL TILVNNVGVV RLKPTTEYVA EDFSFHISTN LESAYHLSQL SHPLLKASGF
101: GSIVMNSSVG GVVSMECGSL YSLTKGAMNQ LARSLACEWA TDGIRINSVA PNFILTDMAE PHLEDAGYKK SLFSRTPLGR AGEPKEVASL VAFLCLPAAS
201: YITGQTICVD GGLTVNGFSY KRQA
101: GSIVMNSSVG GVVSMECGSL YSLTKGAMNQ LARSLACEWA TDGIRINSVA PNFILTDMAE PHLEDAGYKK SLFSRTPLGR AGEPKEVASL VAFLCLPAAS
201: YITGQTICVD GGLTVNGFSY KRQA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.