Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83306 | Canola | plastid | 98.09 | 98.09 |
| Bra000477.1-P | Field mustard | plastid | 98.09 | 98.09 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 83.21 | 83.21 |
| CDY45432 | Canola | cytosol | 82.44 | 82.44 |
| CDX83307 | Canola | peroxisome | 82.44 | 82.44 |
| CDY31773 | Canola | plastid | 82.06 | 82.06 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 81.68 | 81.68 |
| CDX95751 | Canola | peroxisome | 81.68 | 81.68 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 81.68 | 81.68 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 81.3 | 81.3 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 81.3 | 81.3 |
| CDX97899 | Canola | peroxisome | 80.53 | 80.53 |
| CDY40186 | Canola | cytosol | 63.36 | 80.19 |
| CDX97897 | Canola | cytosol, extracellular | 70.23 | 79.65 |
| CDY40185 | Canola | plastid | 79.39 | 79.39 |
| CDY40175 | Canola | plasma membrane | 78.24 | 78.24 |
| CDY45433 | Canola | cytosol | 71.76 | 76.73 |
| CDY45438 | Canola | cytosol | 76.72 | 76.72 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 76.34 | 76.05 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 75.57 | 75.86 |
| CDX97895 | Canola | cytosol | 67.56 | 75.32 |
| CDY31774 | Canola | cytosol | 67.56 | 75.32 |
| CDY40165 | Canola | plastid | 75.19 | 75.19 |
| CDY40171 | Canola | cytosol | 63.36 | 75.11 |
| CDY40183 | Canola | plastid | 74.81 | 74.81 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 74.43 | 74.43 |
| CDY45441 | Canola | cytosol | 62.98 | 73.66 |
| CDY31770 | Canola | plastid | 62.98 | 71.12 |
| CDY09917 | Canola | cytosol | 70.99 | 70.99 |
| CDY06260 | Canola | plastid | 70.61 | 70.61 |
| CDX95752 | Canola | cytosol | 62.98 | 69.33 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 69.08 | 69.08 |
| CDY68057 | Canola | cytosol | 67.56 | 67.56 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 65.65 | 65.65 |
| CDY06706 | Canola | mitochondrion | 65.27 | 64.29 |
| CDY14610 | Canola | mitochondrion | 65.27 | 64.29 |
| CDY10276 | Canola | mitochondrion | 65.27 | 64.29 |
| CDY40177 | Canola | cytosol | 67.18 | 63.54 |
| CDY64214 | Canola | mitochondrion | 40.84 | 62.57 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.99 | 61.8 |
| CDY16437 | Canola | mitochondrion | 62.6 | 61.65 |
| CDY52942 | Canola | mitochondrion | 62.6 | 61.65 |
| CDY04977 | Canola | peroxisome | 61.45 | 61.22 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 58.78 | 61.11 |
| CDY14094 | Canola | peroxisome | 61.07 | 60.84 |
| CDX98899 | Canola | peroxisome | 60.69 | 60.69 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 61.83 | 60.0 |
| KRH24731 | Soybean | nucleus | 60.69 | 59.55 |
| CDX70101 | Canola | peroxisome | 59.54 | 59.54 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 61.07 | 59.04 |
| CDX97893 | Canola | mitochondrion | 61.07 | 59.04 |
| CDY09824 | Canola | mitochondrion | 61.07 | 59.04 |
| CDY09823 | Canola | peroxisome | 61.07 | 59.04 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 60.31 | 58.74 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 24.81 | 58.56 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 60.31 | 58.52 |
| KRH24733 | Soybean | nucleus | 59.16 | 58.49 |
| CDY04975 | Canola | mitochondrion | 24.43 | 57.14 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 55.34 | 57.09 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 24.43 | 56.64 |
| CDX95750 | Canola | cytosol | 59.16 | 56.57 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 54.2 | 56.35 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 17.56 | 56.1 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 22.14 | 55.24 |
| CDY51372 | Canola | plastid | 58.02 | 54.48 |
| CDY72061 | Canola | cytosol | 22.52 | 54.13 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 47.71 | 52.08 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.11 | 51.11 |
| CDY35991 | Canola | plastid | 24.05 | 50.81 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 47.33 | 50.41 |
| KRH29740 | Soybean | cytosol | 18.7 | 50.0 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 55.73 | 47.1 |
| CDX97890 | Canola | cytosol | 59.54 | 46.02 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 20.99 | 43.31 |
| CDY65683 | Canola | cytosol, mitochondrion | 64.5 | 42.36 |
| CDY35231 | Canola | peroxisome | 17.56 | 37.1 |
| CDY31767 | Canola | plastid | 70.99 | 33.04 |
| CDY50145 | Canola | plastid | 82.44 | 29.83 |
| CDX94534 | Canola | peroxisome | 29.01 | 29.8 |
| CDY16690 | Canola | peroxisome | 29.01 | 29.8 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 28.63 | 29.18 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 28.63 | 29.07 |
| CDY43488 | Canola | cytosol | 27.86 | 25.26 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 27.86 | 25.26 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.72 | 24.39 |
| CDY05152 | Canola | cytosol | 21.76 | 23.85 |
| CDY08402 | Canola | cytosol | 25.19 | 22.45 |
| CDY00799 | Canola | peroxisome | 24.81 | 21.81 |
| CDX73802 | Canola | peroxisome | 24.81 | 21.81 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.58 | 17.14 |
Protein Annotations
| EnsemblPlants:CDX95753 | EnsemblPlantsGene:GSBRNA2T00101661001 | Gene3D:3.40.50.720 | GO:A0A078E8N3 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDX95753 |
| ProteinID:CDX95753.1 | SUPFAM:SSF51735 | UniParc:UPI0004EE9618 | MapMan:50.1.1 | : | : |
Description
BnaC03g26340D
Coordinates
chrLK031890:+:1161182..1162509
Molecular Weight (calculated)
28340.8 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.084
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKRWSLQGM TALVTGGASG VGYAIVEELA SFGARIHVCD ISETFLNQSL SEWEKKGFLV SGSICDVTSR PQRETLIQKV SALFDGKLNI LVNNVGVLRG
101: KPTTEYVAED FTFHISTNLE PAFHFSQLSH PLLKASGYGS IIFISSVAGI VSVDCGSIYG LTKGALNQLT RNLACEWAKD GIRSNAVSPN VIRTPLSQTY
201: LDNVRYKEGL FNRTPLGRAA EPNDVASLVV FLCLPAASYI TGQTICVDEG FTVNGFSYQP NA
101: KPTTEYVAED FTFHISTNLE PAFHFSQLSH PLLKASGYGS IIFISSVAGI VSVDCGSIYG LTKGALNQLT RNLACEWAKD GIRSNAVSPN VIRTPLSQTY
201: LDNVRYKEGL FNRTPLGRAA EPNDVASLVV FLCLPAASYI TGQTICVDEG FTVNGFSYQP NA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.