Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY45433 | Canola | cytosol | 83.97 | 89.8 |
| CDY45432 | Canola | cytosol | 88.93 | 88.93 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 87.4 | 87.4 |
| CDY40186 | Canola | cytosol | 66.03 | 83.57 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 81.3 | 81.3 |
| CDY31773 | Canola | plastid | 80.92 | 80.92 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 80.53 | 80.53 |
| CDX97899 | Canola | peroxisome | 80.15 | 80.15 |
| CDX83307 | Canola | peroxisome | 80.15 | 80.15 |
| CDX83306 | Canola | plastid | 80.15 | 80.15 |
| CDX97897 | Canola | cytosol, extracellular | 70.23 | 79.65 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 79.39 | 79.39 |
| CDX95751 | Canola | peroxisome | 79.01 | 79.01 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 79.01 | 79.01 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 78.24 | 78.24 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 76.34 | 76.34 |
| CDY40183 | Canola | plastid | 75.95 | 75.95 |
| CDY40175 | Canola | plasma membrane | 75.19 | 75.19 |
| CDY31774 | Canola | cytosol | 67.18 | 74.89 |
| CDX97895 | Canola | cytosol | 67.18 | 74.89 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 74.81 | 74.52 |
| CDY45438 | Canola | cytosol | 74.43 | 74.43 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 73.66 | 73.95 |
| CDY40171 | Canola | cytosol | 62.21 | 73.76 |
| CDY40165 | Canola | plastid | 73.28 | 73.28 |
| CDY45441 | Canola | cytosol | 61.45 | 71.88 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 70.23 | 70.23 |
| CDY31770 | Canola | plastid | 61.07 | 68.97 |
| CDY68057 | Canola | cytosol | 67.94 | 67.94 |
| CDY10276 | Canola | mitochondrion | 67.94 | 66.92 |
| CDY14610 | Canola | mitochondrion | 67.94 | 66.92 |
| CDY06706 | Canola | mitochondrion | 67.56 | 66.54 |
| CDY09917 | Canola | cytosol | 66.41 | 66.41 |
| CDX95752 | Canola | cytosol | 60.31 | 66.39 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 65.65 | 65.65 |
| CDY06260 | Canola | plastid | 64.89 | 64.89 |
| CDY16437 | Canola | mitochondrion | 65.27 | 64.29 |
| CDY64214 | Canola | mitochondrion | 41.22 | 63.16 |
| CDY52942 | Canola | mitochondrion | 63.74 | 62.78 |
| CDY40177 | Canola | cytosol | 65.27 | 61.73 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 58.78 | 61.11 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 19.08 | 60.98 |
| Solyc03g096650.1.1 | Tomato | cytosol | 20.61 | 60.67 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 25.57 | 60.36 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.05 | 60.0 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 56.87 | 59.13 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 60.69 | 58.89 |
| KRH24733 | Soybean | nucleus | 59.54 | 58.87 |
| KRH24731 | Soybean | nucleus | 59.92 | 58.8 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 60.31 | 58.3 |
| CDY04977 | Canola | peroxisome | 58.4 | 58.17 |
| CDX98899 | Canola | peroxisome | 58.02 | 58.02 |
| CDX97893 | Canola | mitochondrion | 59.92 | 57.93 |
| CDY09823 | Canola | peroxisome | 59.92 | 57.93 |
| CDY09824 | Canola | mitochondrion | 59.92 | 57.93 |
| CDY14094 | Canola | peroxisome | 58.02 | 57.79 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 59.54 | 57.78 |
| CDX70101 | Canola | peroxisome | 57.63 | 57.63 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 24.81 | 57.52 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 54.96 | 56.69 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.02 | 56.51 |
| CDY04975 | Canola | mitochondrion | 24.05 | 56.25 |
| CDX95750 | Canola | cytosol | 57.63 | 55.11 |
| CDY35991 | Canola | plastid | 25.95 | 54.84 |
| CDY72061 | Canola | cytosol | 22.52 | 54.13 |
| CDY51372 | Canola | plastid | 56.11 | 52.69 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 46.95 | 51.25 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 46.95 | 50.0 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 33.59 | 48.89 |
| KRH29740 | Soybean | cytosol | 17.94 | 47.96 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 54.2 | 45.81 |
| CDX97890 | Canola | cytosol | 57.25 | 44.25 |
| CDY65683 | Canola | cytosol, mitochondrion | 66.79 | 43.86 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 20.99 | 43.31 |
| CDY35231 | Canola | peroxisome | 16.41 | 34.68 |
| CDY31767 | Canola | plastid | 73.28 | 34.1 |
| CDY50145 | Canola | plastid | 82.06 | 29.7 |
| CDY16690 | Canola | peroxisome | 28.63 | 29.41 |
| CDX94534 | Canola | peroxisome | 28.63 | 29.41 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 28.24 | 28.68 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 27.86 | 28.4 |
| CDY43488 | Canola | cytosol | 26.34 | 23.88 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 25.95 | 23.69 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 24.81 | 22.49 |
| CDY00799 | Canola | peroxisome | 25.57 | 22.48 |
| CDX73802 | Canola | peroxisome | 25.57 | 22.48 |
| CDY08402 | Canola | cytosol | 25.19 | 22.45 |
| CDY05152 | Canola | cytosol | 19.47 | 21.34 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.58 | 17.14 |
Protein Annotations
| EnsemblPlants:CDY40185 | EnsemblPlantsGene:GSBRNA2T00069321001 | Gene3D:3.40.50.720 | GO:A0A078HNR8 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | PFAM:PF13561 | PRINTS:PR00081 | ProteinID:CDY40185 | ProteinID:CDY40185.1 |
| SUPFAM:SSF51735 | UniParc:UPI0004EE0B7E | UniProt:A0A078HNR8 | MapMan:50.1.1 | : | : |
Description
BnaC04g14130DBnaC04g14130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNR8]
Coordinates
chrLK032465:-:235615..236732
Molecular Weight (calculated)
28130.9 Da
IEP (calculated)
7.072
GRAVY (calculated)
0.081
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKRWSLQGM TALVTGGGRG IGYAIVEELA GFGAKIHVCD ISETLLNHSL SEWVKKGFQV SGSVCDVTSR PERENLMQKV STLFNGKLNI FMNNVGGVRS
101: KPMTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IIFISSVAGV VSIESGSICS LAKGALNQLA KNLACEWAKD GIRANAVAPN VIKTPMSQPY
201: LDDVRFKKGL FARTPLGRAG EPNEVASLAV FLCLPAASYI TGQTICVDGV LTINGFSDQP HA
101: KPMTEYDADD FDFHIATNLE PAFHFCQLSH PLLKASGYGS IIFISSVAGV VSIESGSICS LAKGALNQLA KNLACEWAKD GIRANAVAPN VIKTPMSQPY
201: LDDVRFKKGL FARTPLGRAG EPNEVASLAV FLCLPAASYI TGQTICVDGV LTINGFSDQP HA
001: MDKRWSLQGM TALVTGAASG IGYAIVEELA GFGARIHVCD ISETLLNQSL REWEKKGFQV SGSVCDVTSR PEREKLMQTV SSLFDGKLNI LVNNVGVLRA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
101: KPTTEYVADD FTFHISTNLE AAYHFCQLSH PLLKTSGYGS IVFLSSVSGV VSITDCGSLY GLTKGALNQL ARNLACEWAK DGIRANAVAP NVVKTAQSQF
201: FLQDVSKKEG LFSRTPLGRS GEPNEVASLV VFLCLPAASY ITGQTICIDG GLTVYGFSSQ PQA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IKL5]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.