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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
BaCelLo:cytosol
MultiLoc:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030683.1-P Field mustard cytosol, mitochondrion, plastid 98.86 98.86
CDX86486 Canola cytosol, peroxisome, plastid 96.18 96.18
CDX86485 Canola cytosol, peroxisome, plastid 90.84 90.84
CDY06260 Canola plastid 79.39 79.39
CDY09917 Canola cytosol 79.39 79.39
CDY40188 Canola cytosol, peroxisome, plasma membrane 70.99 70.99
CDY45432 Canola cytosol 70.99 70.99
CDY31773 Canola plastid 70.99 70.99
CDY31772 Canola cytosol, peroxisome, plastid 70.61 70.61
CDY40186 Canola cytosol 55.73 70.53
CDY31768 Canola cytosol, peroxisome, plastid 70.23 70.23
CDX97899 Canola peroxisome 69.85 69.85
CDY52942 Canola mitochondrion 70.61 69.55
VIT_06s0004g05440.t01 Wine grape cytosol 21.76 69.51
CDX97897 Canola cytosol, extracellular 61.07 69.26
CDY16437 Canola mitochondrion 70.23 69.17
CDY64214 Canola mitochondrion 45.04 69.01
CDY40179 Canola cytosol, peroxisome, plastid 68.7 68.97
CDY45434 Canola cytosol, nucleus, plastid 68.7 68.7
CDX83307 Canola peroxisome 68.7 68.7
CDY14610 Canola mitochondrion 69.47 68.42
CDY10276 Canola mitochondrion 69.47 68.42
CDY06706 Canola mitochondrion 69.47 68.42
CDX83306 Canola plastid 68.32 68.32
CDY45441 Canola cytosol 58.4 68.3
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 68.32 68.06
CDY40183 Canola plastid 67.94 67.94
CDY40165 Canola plastid 67.94 67.94
CDY40185 Canola plastid 67.94 67.94
CDY45438 Canola cytosol 67.94 67.94
CDX95751 Canola peroxisome 67.94 67.94
CDY40175 Canola plasma membrane 67.56 67.56
CDX95753 Canola cytosol, peroxisome, plastid 67.56 67.56
CDY72061 Canola cytosol 27.86 66.97
CDY31774 Canola cytosol 59.92 66.81
VIT_06s0004g05400.t01 Wine grape cytosol 28.24 66.67
CDX97895 Canola cytosol 59.54 66.38
Solyc03g096650.1.1 Tomato cytosol 22.52 66.29
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 63.74 66.27
CDY40182 Canola cytosol, peroxisome, plastid 66.03 66.03
CDY45435 Canola cytosol, peroxisome, plastid 66.03 66.03
CDY45433 Canola cytosol 61.45 65.71
CDY09823 Canola peroxisome 67.94 65.68
CDX97893 Canola mitochondrion 67.56 65.31
CDY09824 Canola mitochondrion 67.56 65.31
CDY40171 Canola cytosol 54.96 65.16
CDY14094 Canola peroxisome 65.27 65.02
CDY31776 Canola cytosol, peroxisome, plastid 67.18 64.94
VIT_06s0004g05310.t01 Wine grape cytosol 27.86 64.6
CDY04977 Canola peroxisome 64.5 64.26
CDX98899 Canola peroxisome 64.12 64.12
VIT_06s0004g05370.t01 Wine grape peroxisome 61.45 63.89
CDY31770 Canola plastid 56.49 63.79
CDY04975 Canola mitochondrion 27.1 63.39
CDX70101 Canola peroxisome 63.36 63.36
VIT_06s0004g05380.t01 Wine grape plastid 65.27 63.33
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 64.89 62.96
KRH24731 Soybean nucleus 63.74 62.55
CDY51372 Canola plastid 65.27 61.29
VIT_06s0004g05330.t01 Wine grape peroxisome 59.16 61.02
CDY16436 Canola endoplasmic reticulum, vacuole 24.43 60.95
CDX95750 Canola cytosol 63.74 60.95
KRH24733 Soybean nucleus 61.45 60.75
CDX95752 Canola cytosol 54.2 59.66
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 60.69 59.11
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 53.44 58.33
CDY40177 Canola cytosol 60.31 57.04
KRH29740 Soybean cytosol 20.61 55.1
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 51.15 54.47
CDY35991 Canola plastid 24.81 52.42
VIT_06s0004g05450.t01 Wine grape plasma membrane 35.5 51.67
GSMUA_Achr5P04570_001 Banana cytosol 24.81 51.18
CDX97890 Canola cytosol 65.65 50.74
CDX98898 Canola cytosol, peroxisome, plasma membrane 59.16 50.0
CDY65683 Canola cytosol, mitochondrion 71.37 46.87
CDY31767 Canola plastid 71.37 33.21
CDY35231 Canola peroxisome 14.89 31.45
CDY16690 Canola peroxisome 29.39 30.2
CDX94534 Canola peroxisome 29.39 30.2
CDX76382 Canola cytosol, mitochondrion, peroxisome 27.48 28.02
CDY27447 Canola cytosol, mitochondrion, peroxisome 27.48 27.91
CDY27781 Canola cytosol, peroxisome, plastid 29.39 26.64
CDY43488 Canola cytosol 29.01 26.3
CDY50145 Canola plastid 70.99 25.69
CDY17559 Canola cytoskeleton, nucleus, peroxisome 27.86 25.44
CDY05152 Canola cytosol 22.14 24.27
CDX73802 Canola peroxisome 25.19 22.15
CDY00799 Canola peroxisome 25.19 22.15
CDY08402 Canola cytosol 24.43 21.77
CDY05153 Canola cytosol, nucleus, plastid 4.58 17.14
Protein Annotations
EnsemblPlants:CDY68057EnsemblPlantsGene:GSBRNA2T00069170001Gene3D:3.40.50.720GO:A0A078JRK0GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR42898PANTHER:PTHR42898:SF7PFAM:PF13561
PRINTS:PR00080PRINTS:PR00081ProteinID:CDY68057ProteinID:CDY68057.1SEG:segSUPFAM:SSF51735
TMHMM:TMhelixUniParc:UPI0004EDB7B7UniProt:A0A078JRK0MapMan:50.1.1::
Description
BnaAnng26060DBnaAnng26060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRK0]
Coordinates
chrLK036808:+:563..2044
Molecular Weight (calculated)
28280.9 Da
IEP (calculated)
7.218
GRAVY (calculated)
0.072
Length
262 amino acids
Sequence
(BLAST)
001: MDSRWSLRGM TALVTGGTKG IGYAIVEELA GFGARVHTCA RDQTLLDECL SEWKEKGFQV TGSVCDVSSR PQRDELMKTV SSLFSGKLNI LINNVGTLVS
101: KPTTEFTAQD FSGQIATNLD SAYHFSQLAH PLLKASGFGS IVFLSSVCGV VSSGFVSIYS LTKGCMNQLA RNLACEWASD GIRANSVAPW MTKTPLVQKR
201: LDDEKFAEAI FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP EV
Best Arabidopsis Sequence Match ( AT1G07450.1 )
(BLAST)
001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
Arabidopsis Description
Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.