CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31774	Canola	cytosol	99.57	99.57
CDY31770	Canola	plastid	86.81	87.93
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	98.3	87.83
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	92.77	82.89
CDY40171	Canola	cytosol	74.04	78.73
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	84.68	75.95
CDY40165	Canola	plastid	82.55	74.05
CDY45438	Canola	cytosol	82.13	73.66
CDY40179	Canola	cytosol, peroxisome, plastid	81.28	73.18
CDY40175	Canola	plasma membrane	80.85	72.52
CDY45441	Canola	cytosol	67.66	70.98
CDY31772	Canola	cytosol, peroxisome, plastid	78.72	70.61
CDY45434	Canola	cytosol, nucleus, plastid	78.3	70.23
CDY40183	Canola	plastid	77.87	69.85
CDY31768	Canola	cytosol, peroxisome, plastid	77.87	69.85
CDX97899	Canola	peroxisome	77.87	69.85
CDY31773	Canola	plastid	77.02	69.08
CDY45432	Canola	cytosol	76.6	68.7
CDX83306	Canola	plastid	76.17	68.32
CDY40188	Canola	cytosol, peroxisome, plasma membrane	75.32	67.56
CDX95753	Canola	cytosol, peroxisome, plastid	75.32	67.56
CDY40185	Canola	plastid	74.89	67.18
CDX97897	Canola	cytosol, extracellular	65.96	67.1
CDX83307	Canola	peroxisome	74.47	66.79
CDX95751	Canola	peroxisome	73.19	65.65
CDY40182	Canola	cytosol, peroxisome, plastid	71.91	64.5
CDY40186	Canola	cytosol	56.6	64.25
CDY64214	Canola	mitochondrion	46.38	63.74
CDY45435	Canola	cytosol, peroxisome, plastid	71.06	63.74
CDY45433	Canola	cytosol	66.38	63.67
CDY40177	Canola	cytosol	74.47	63.18
VIT_06s0004g05400.t01	Wine grape	cytosol	28.94	61.26
CDX86486	Canola	cytosol, peroxisome, plastid	67.66	60.69
Solyc03g096650.1.1	Tomato	cytosol	22.55	59.55
CDY68057	Canola	cytosol	66.38	59.54
CDY09917	Canola	cytosol	66.38	59.54
VIT_06s0004g05310.t01	Wine grape	cytosol	28.51	59.29
CDX86485	Canola	cytosol, peroxisome, plastid	65.96	59.16
CDY16437	Canola	mitochondrion	66.38	58.65
VIT_06s0004g05440.t01	Wine grape	cytosol	20.43	58.54
CDY06260	Canola	plastid	65.11	58.4
CDY14610	Canola	mitochondrion	65.96	58.27
CDY52942	Canola	mitochondrion	65.96	58.27
CDY10276	Canola	mitochondrion	65.96	58.27
CDY06706	Canola	mitochondrion	65.96	58.27
CDX95752	Canola	cytosol	56.6	55.88
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	59.57	55.56
CDY72061	Canola	cytosol	25.53	55.05
VIT_06s0004g05380.t01	Wine grape	plastid	62.13	54.07
CDY31776	Canola	cytosol, peroxisome, plastid	62.13	53.87
CDY09823	Canola	peroxisome	62.13	53.87
CDY09824	Canola	mitochondrion	62.13	53.87
CDX97893	Canola	mitochondrion	62.13	53.87
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.28	53.33
KRH24731	Soybean	nucleus	60.0	52.81
VIT_06s0004g05370.t01	Wine grape	peroxisome	56.6	52.78
VIT_06s0004g05330.t01	Wine grape	peroxisome	56.6	52.36
CDY04977	Canola	peroxisome	58.3	52.09
KRH24733	Soybean	nucleus	58.3	51.7
CDX98899	Canola	peroxisome	57.45	51.53
CDY14094	Canola	peroxisome	57.45	51.33
KRH29740	Soybean	cytosol	21.28	51.02
CDX70101	Canola	peroxisome	56.6	50.76
CDX95750	Canola	cytosol	58.3	50.0
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	56.17	49.07
CDY51372	Canola	plastid	57.45	48.39
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	48.09	47.08
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.09	45.94
CDY16436	Canola	endoplasmic reticulum, vacuole	20.0	44.76
GSMUA_Achr5P04570_001	Banana	cytosol	22.98	42.52
CDY35991	Canola	plastid	22.13	41.94
VIT_06s0004g05450.t01	Wine grape	plasma membrane	31.49	41.11
CDY04975	Canola	mitochondrion	19.57	41.07
CDX97890	Canola	cytosol	58.3	40.41
CDX98898	Canola	cytosol, peroxisome, plasma membrane	52.34	39.68
CDY65683	Canola	cytosol, mitochondrion	66.38	39.1
CDY31767	Canola	plastid	69.79	29.13
CDY35231	Canola	peroxisome	15.32	29.03
CDY16690	Canola	peroxisome	29.79	27.45
CDX94534	Canola	peroxisome	29.79	27.45
CDX76382	Canola	cytosol, mitochondrion, peroxisome	28.94	26.46
CDY27447	Canola	cytosol, mitochondrion, peroxisome	28.51	25.97
CDY50145	Canola	plastid	79.15	25.69
CDY27781	Canola	cytosol, peroxisome, plastid	26.81	21.8
CDY43488	Canola	cytosol	25.96	21.11
CDY08402	Canola	cytosol	25.53	20.41
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	24.68	20.21
CDY05153	Canola	cytosol, nucleus, plastid	5.96	20.0
CDX73802	Canola	peroxisome	24.68	19.46
CDY00799	Canola	peroxisome	24.68	19.46
CDY05152	Canola	cytosol	19.57	19.25

Protein Annotations

EnsemblPlants:CDX97895	EnsemblPlantsGene:GSBRNA2T00105234001	Gene3D:3.40.50.720	GO:A0A078E705	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDX97895
ProteinID:CDX97895.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEC074	MapMan:50.1.1	:

Description

BnaC04g40440D

Coordinates

chrLK031901:-:1266341..1268134

Molecular Weight (calculated)

25239.1 Da

IEP (calculated)

6.232

GRAVY (calculated)

0.011

Length

235 amino acids

Sequence
(BLAST)

001: MDKRWSLEGM TALVTGGASG IGHAIVEELA SFGARIHVCD ISETLLNQSL SEWEKKGFQV SGSTCDVSSR PEREILMQII SGIFDGKLNI LVNNVGVVHT
101: KPTTEYEADD FSFHISTNLE SAYHLSQLSH PLLKASGIGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNKTTMAKP
201: FFKDTGYEKT SYITGQTICV DGGLTVNGFS YQPNA

Best Arabidopsis Sequence Match ( AT2G29310.1 )
(BLAST)

001: MDKRWSLQGM TALVTGAASG IGYAIVEELA SFGAIIHICD ISETLLSQSL SEWEKKGFQV SGSICDVASR PDREKLMQTV SSLFDGKLNI LVNNVGVIRG
101: KPTTEYVAED FSYHISTNLE PAFHFSQLSH LLLKASGFGS IVFMSSATGV VSVQCGSIYS LTKGALNQLT RNLACEWAKD GIRANAVAPN VVKTPLSQSY
201: LEDVGFKEAL FSRTPLGRAG EPNEVASLVV FLCLPAASYI TGQTICIDGG FTVNAFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g29310 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW14]
SUBAcon: [peroxisome,extracellular,endoplasmic reticulum,vacuole,plastid,cytosol,plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.