Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029476.1-P | Field mustard | peroxisome | 98.82 | 98.82 |
| CDY16690 | Canola | peroxisome | 98.43 | 98.43 |
| CDY35231 | Canola | peroxisome | 47.84 | 98.39 |
| AT4G05530.1 | Thale cress | peroxisome | 93.73 | 94.09 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 85.1 | 84.44 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 85.1 | 84.11 |
| KRH02005 | Soybean | endoplasmic reticulum, nucleus | 74.51 | 75.4 |
| Solyc04g014670.2.1 | Tomato | plastid | 72.94 | 73.52 |
| Zm00001d019439_P001 | Maize | extracellular | 70.98 | 71.54 |
| EER98384 | Sorghum | peroxisome | 70.59 | 71.15 |
| PGSC0003DMT400034518 | Potato | peroxisome | 70.2 | 70.47 |
| EES19901 | Sorghum | peroxisome | 69.8 | 70.36 |
| KRH11511 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 70.2 | 70.2 |
| KRH36525 | Soybean | endoplasmic reticulum | 70.2 | 70.2 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 68.24 | 68.77 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 68.24 | 68.77 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 67.84 | 68.38 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 25.49 | 67.71 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 67.06 | 67.59 |
| Os09t0133200-01 | Rice | peroxisome | 65.88 | 66.4 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 56.47 | 65.16 |
| Zm00001d038897_P001 | Maize | peroxisome | 68.63 | 62.72 |
| KRH70902 | Soybean | cytosol | 24.31 | 56.36 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 50.59 | 50.99 |
| CDX98899 | Canola | peroxisome | 33.33 | 32.44 |
| CDY04977 | Canola | peroxisome | 33.33 | 32.32 |
| CDX70101 | Canola | peroxisome | 32.94 | 32.06 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 32.94 | 32.06 |
| CDY14094 | Canola | peroxisome | 32.94 | 31.94 |
| CDY40183 | Canola | plastid | 32.55 | 31.68 |
| CDY40175 | Canola | plasma membrane | 32.55 | 31.68 |
| CDY52942 | Canola | mitochondrion | 32.55 | 31.2 |
| CDY16437 | Canola | mitochondrion | 32.55 | 31.2 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 32.16 | 31.18 |
| CDY09823 | Canola | peroxisome | 32.94 | 31.0 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 32.94 | 31.0 |
| CDY40186 | Canola | cytosol | 25.1 | 30.92 |
| CDY09917 | Canola | cytosol | 31.76 | 30.92 |
| CDX97893 | Canola | mitochondrion | 32.55 | 30.63 |
| CDY09824 | Canola | mitochondrion | 32.55 | 30.63 |
| CDY06260 | Canola | plastid | 31.37 | 30.53 |
| CDY06706 | Canola | mitochondrion | 31.76 | 30.45 |
| CDY64214 | Canola | mitochondrion | 20.39 | 30.41 |
| CDY72061 | Canola | cytosol | 12.94 | 30.28 |
| CDY31774 | Canola | cytosol | 27.84 | 30.21 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 30.98 | 30.15 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 30.98 | 30.15 |
| CDY45432 | Canola | cytosol | 30.98 | 30.15 |
| CDY35991 | Canola | plastid | 14.51 | 29.84 |
| CDX97895 | Canola | cytosol | 27.45 | 29.79 |
| CDX83307 | Canola | peroxisome | 30.59 | 29.77 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 30.59 | 29.77 |
| CDY14610 | Canola | mitochondrion | 30.98 | 29.7 |
| CDY10276 | Canola | mitochondrion | 30.98 | 29.7 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 12.16 | 29.52 |
| CDY40171 | Canola | cytosol | 25.49 | 29.41 |
| CDY51372 | Canola | plastid | 32.16 | 29.39 |
| CDY45438 | Canola | cytosol | 30.2 | 29.39 |
| CDX95751 | Canola | peroxisome | 30.2 | 29.39 |
| CDY68057 | Canola | cytosol | 30.2 | 29.39 |
| CDX83306 | Canola | plastid | 30.2 | 29.39 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 30.2 | 29.39 |
| CDY31773 | Canola | plastid | 30.2 | 29.39 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 30.2 | 29.39 |
| CDX95750 | Canola | cytosol | 31.37 | 29.2 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 29.8 | 29.12 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 29.8 | 29.01 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 29.8 | 29.01 |
| CDX97899 | Canola | peroxisome | 29.8 | 29.01 |
| CDY31770 | Canola | plastid | 26.27 | 28.88 |
| CDY40185 | Canola | plastid | 29.41 | 28.63 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 29.41 | 28.63 |
| CDY04975 | Canola | mitochondrion | 12.55 | 28.57 |
| CDY40165 | Canola | plastid | 29.02 | 28.24 |
| CDY45441 | Canola | cytosol | 24.71 | 28.12 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 30.59 | 26.99 |
| CDX97897 | Canola | cytosol, extracellular | 24.31 | 26.84 |
| CDY45433 | Canola | cytosol | 25.49 | 26.53 |
| CDX95752 | Canola | cytosol | 24.31 | 26.05 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 31.37 | 25.81 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 28.63 | 25.44 |
| CDY43488 | Canola | cytosol | 28.63 | 25.26 |
| CDY40177 | Canola | cytosol | 26.67 | 24.55 |
| CDX73802 | Canola | peroxisome | 28.63 | 24.5 |
| CDY00799 | Canola | peroxisome | 28.24 | 24.16 |
| CDY08402 | Canola | cytosol | 27.84 | 24.15 |
| CDY05152 | Canola | cytosol | 21.96 | 23.43 |
| CDX97890 | Canola | cytosol | 30.98 | 23.3 |
| CDY65683 | Canola | cytosol, mitochondrion | 31.76 | 20.3 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.1 | 18.57 |
| VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 72.16 | 17.88 |
| CDY31767 | Canola | plastid | 33.33 | 15.1 |
| CDY50145 | Canola | plastid | 29.8 | 10.5 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078E1R4 | EnsemblPlants:CDX94534 | ProteinID:CDX94534 | ProteinID:CDX94534.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00157776001 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43943 |
| PANTHER:PTHR43943:SF2 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI0004EC279F | SEG:seg |
Description
BnaC09g23020D
Coordinates
chrLK031882:-:831259..832854
Molecular Weight (calculated)
26946.6 Da
IEP (calculated)
8.680
GRAVY (calculated)
0.097
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGKKIGRRL EGKVAIVTAS TQGIGFGIIE RFGLEGASVV VSSRKQANVE EAVEKLKAKG IDAYGIVCHV SNAQHRRNLV EKTVQKYGKI DILVCNAAAN
101: PSTDPILSTK EAVLDKLWEI NVKSSILLLQ DVAPHLEKGS SVIFITSIAG FQPQGSMAMY GVTKTALLGL TKALAAEMGP DTRVNAVAPG FVPTHFASFI
201: TGNSQVRESI EEKTLLNRLG TTGDMAAAAA FLASDDSSYI TGETLVVAGG MPSRL
101: PSTDPILSTK EAVLDKLWEI NVKSSILLLQ DVAPHLEKGS SVIFITSIAG FQPQGSMAMY GVTKTALLGL TKALAAEMGP DTRVNAVAPG FVPTHFASFI
201: TGNSQVRESI EEKTLLNRLG TTGDMAAAAA FLASDDSSYI TGETLVVAGG MPSRL
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.