CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09824	Canola	mitochondrion	100.0	100.0
CDY09823	Canola	peroxisome	97.05	97.05
CDY31776	Canola	cytosol, peroxisome, plastid	94.46	94.46
CDY72061	Canola	cytosol	35.79	88.99
AT2G29150.1	Thale cress	peroxisome	80.81	81.72
CDY51372	Canola	plastid	81.55	79.21
CDX95750	Canola	cytosol	76.01	75.18
VIT_06s0004g05400.t01	Wine grape	cytosol	28.78	70.27
VIT_06s0004g05440.t01	Wine grape	cytosol	20.66	68.29
VIT_06s0004g05310.t01	Wine grape	cytosol	28.41	68.14
CDY68057	Canola	cytosol	65.31	67.56
CDX86485	Canola	cytosol, peroxisome, plastid	65.31	67.56
Solyc03g096650.1.1	Tomato	cytosol	22.14	67.42
CDX86486	Canola	cytosol, peroxisome, plastid	64.58	66.79
CDY06706	Canola	mitochondrion	64.94	66.17
CDY45434	Canola	cytosol, nucleus, plastid	63.84	66.03
CDY14610	Canola	mitochondrion	64.58	65.79
CDY10276	Canola	mitochondrion	64.58	65.79
CDY09917	Canola	cytosol	63.47	65.65
CDY16437	Canola	mitochondrion	64.21	65.41
CDX97890	Canola	cytosol	81.55	65.19
CDY40183	Canola	plastid	62.73	64.89
CDY06260	Canola	plastid	62.73	64.89
VIT_06s0004g05370.t01	Wine grape	peroxisome	60.15	64.68
CDY52942	Canola	mitochondrion	63.47	64.66
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	59.78	64.29
CDY64214	Canola	mitochondrion	40.22	63.74
CDY45441	Canola	cytosol	52.4	63.39
CDY40175	Canola	plasma membrane	61.25	63.36
CDY04977	Canola	peroxisome	61.25	63.12
CDY14094	Canola	peroxisome	61.25	63.12
CDY62820	Canola	cytosol, endoplasmic reticulum, peroxisome	61.25	63.12
VIT_06s0004g05380.t01	Wine grape	plastid	62.73	62.96
KRH24731	Soybean	nucleus	61.99	62.92
CDY40179	Canola	cytosol, peroxisome, plastid	60.52	62.84
CDY31772	Canola	cytosol, peroxisome, plastid	60.52	62.6
CDY40188	Canola	cytosol, peroxisome, plasma membrane	60.52	62.6
CDY45438	Canola	cytosol	60.52	62.6
CDY31774	Canola	cytosol	54.24	62.55
CDY40171	Canola	cytosol	50.92	62.44
CDX97895	Canola	cytosol	53.87	62.13
CDX97899	Canola	peroxisome	59.78	61.83
CDX83306	Canola	plastid	59.78	61.83
CDY40165	Canola	plastid	59.41	61.45
CDY45432	Canola	cytosol	59.41	61.45
CDX98899	Canola	peroxisome	59.41	61.45
CDY31768	Canola	cytosol, peroxisome, plastid	59.41	61.45
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	60.89	61.34
KRH24733	Soybean	nucleus	59.78	61.13
CDX95753	Canola	cytosol, peroxisome, plastid	59.04	61.07
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	60.52	60.74
CDX83307	Canola	peroxisome	58.67	60.69
CDX95751	Canola	peroxisome	58.67	60.69
CDY40186	Canola	cytosol	46.13	60.39
CDY31773	Canola	plastid	58.3	60.31
VIT_06s0004g05330.t01	Wine grape	peroxisome	56.46	60.24
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	53.14	60.0
CDX70101	Canola	peroxisome	57.93	59.92
CDY40185	Canola	plastid	57.93	59.92
CDY40182	Canola	cytosol, peroxisome, plastid	57.56	59.54
CDY45435	Canola	cytosol, peroxisome, plastid	56.83	58.78
CDY31770	Canola	plastid	49.82	58.19
CDY16436	Canola	endoplasmic reticulum, vacuole	22.51	58.1
CDX97897	Canola	cytosol, extracellular	49.45	58.01
CDY45433	Canola	cytosol	51.66	57.14
CDY04975	Canola	mitochondrion	22.88	55.36
KRH29740	Soybean	cytosol	19.93	55.1
CDY35991	Canola	plastid	24.72	54.03
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	48.34	53.25
CDX95752	Canola	cytosol	46.49	52.94
CDY40177	Canola	cytosol	53.87	52.71
VIT_06s0004g05450.t01	Wine grape	plasma membrane	34.32	51.67
GSMUA_Achr5P04570_001	Banana	cytosol	23.25	49.61
CDX98898	Canola	cytosol, peroxisome, plasma membrane	54.98	48.06
CDY65683	Canola	cytosol, mitochondrion	63.1	42.86
CDY35231	Canola	peroxisome	15.87	34.68
CDX94534	Canola	peroxisome	30.63	32.55
CDY16690	Canola	peroxisome	30.26	32.16
CDY31767	Canola	plastid	63.47	30.55
CDX76382	Canola	cytosol, mitochondrion, peroxisome	28.78	30.35
CDY27447	Canola	cytosol, mitochondrion, peroxisome	28.78	30.23
CDY43488	Canola	cytosol	29.52	27.68
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	28.78	27.18
CDY27781	Canola	cytosol, peroxisome, plastid	28.41	26.64
CDY05152	Canola	cytosol	21.4	24.27
CDY50145	Canola	plastid	61.25	22.93
CDY08402	Canola	cytosol	23.62	21.77
CDY00799	Canola	peroxisome	23.62	21.48
CDX73802	Canola	peroxisome	23.62	21.48
CDY05153	Canola	cytosol, nucleus, plastid	4.8	18.57

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	GO:A0A078F9Z3	UniProt:A0A078F9Z3	EnsemblPlants:CDX97893	ProteinID:CDX97893
ProteinID:CDX97893.1	ProteinID:CDY09824.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00105232001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0004EE72FF	:	:	:	:

Description

BnaC04g40460DBnaC04g40460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F9Z3]

Coordinates

chrLK031901:-:1248556..1250656

Molecular Weight (calculated)

29101.9 Da

IEP (calculated)

6.023

GRAVY (calculated)

0.069

Length

271 amino acids

Sequence
(BLAST)

001: MTNTRESLRD NSRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQECLL EWQAKGFQVT TSVCDVSSRV QREKLMETVS TLFQGKLNIL
101: VNNAGTCITK PTTEFSAEDF SFLMATNLES AFHLSQLAHP FLKASGSGSI VFMSSAAGVV HVNVGSIYGA TKGAMNQLAR NLACEWASDS IRVNSVCPWF
201: IATPLANKFM DHEELKKEVE TKTPMGRVGE ANEVSSLVAF LCFPAASYIT GQVICVDGGA TINGLSFKSL P

Best Arabidopsis Sequence Match ( AT2G29350.1 )
(BLAST)

001: MAKEGGLGEN SRWSLGGMTA LVTGGSKGIG EAVVEELAML GAKVHTCARD ETQLQERLRE WQAKGFQVTT SVCDVSSRDQ RVKLMETVSS LYQGKLNILV
101: NNVGTSIFKP TTEYTAEDFS FVMATNLESA FHLSQLAHPL LKASGSGSIV LISSAAGVVH VNVGSIYGAT KGAMNQLARN LACEWASDNI RTNSVCPWYI
201: TTPLSNDFFD EEFKKEAVRT TPMGRVGEAN EVSPLVAFLC LPSASYITGQ TICVDGGATV NGFSFKTMP

Arabidopsis Description

SAG13SAG13 [Source:UniProtKB/TrEMBL;Acc:A0A178VTS8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.