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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY40171 Canola cytosol 79.77 94.57
CDY40179 Canola cytosol, peroxisome, plastid 83.59 83.91
CDY45438 Canola cytosol 83.59 83.59
CDY45441 Canola cytosol 71.37 83.48
CDY62820 Canola cytosol, endoplasmic reticulum, peroxisome 82.82 82.51
CDY40165 Canola plastid 82.06 82.06
CDY40183 Canola plastid 81.3 81.3
CDY45434 Canola cytosol, nucleus, plastid 81.3 81.3
CDY31774 Canola cytosol 72.9 81.28
CDY31772 Canola cytosol, peroxisome, plastid 80.92 80.92
CDX97895 Canola cytosol 72.52 80.85
CDY31768 Canola cytosol, peroxisome, plastid 79.77 79.77
CDX97899 Canola peroxisome 79.39 79.39
CDX83306 Canola plastid 79.01 79.01
CDY40188 Canola cytosol, peroxisome, plasma membrane 79.01 79.01
CDY31773 Canola plastid 78.63 78.63
CDY45432 Canola cytosol 78.24 78.24
CDX95753 Canola cytosol, peroxisome, plastid 78.24 78.24
CDX97897 Canola cytosol, extracellular 68.32 77.49
CDX95751 Canola peroxisome 76.72 76.72
CDX83307 Canola peroxisome 76.72 76.72
CDY31770 Canola plastid 67.18 75.86
CDY40186 Canola cytosol 59.92 75.85
CDY40185 Canola plastid 75.19 75.19
CDY40182 Canola cytosol, peroxisome, plastid 74.43 74.43
CDY45435 Canola cytosol, peroxisome, plastid 73.28 73.28
CDY45433 Canola cytosol 67.56 72.24
CDY40177 Canola cytosol 75.95 71.84
CDX86486 Canola cytosol, peroxisome, plastid 69.08 69.08
CDX95752 Canola cytosol 61.83 68.07
CDY06706 Canola mitochondrion 69.08 68.05
CDY10276 Canola mitochondrion 68.7 67.67
CDY14610 Canola mitochondrion 68.7 67.67
CDY68057 Canola cytosol 67.56 67.56
CDX86485 Canola cytosol, peroxisome, plastid 67.18 67.18
CDY09917 Canola cytosol 66.41 66.41
CDY06260 Canola plastid 65.65 65.65
CDY64214 Canola mitochondrion 42.75 65.5
CDY52942 Canola mitochondrion 66.03 65.04
CDY16437 Canola mitochondrion 66.03 65.04
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 60.69 63.1
Solyc03g096650.1.1 Tomato cytosol 21.37 62.92
VIT_06s0004g05380.t01 Wine grape plastid 63.36 61.48
CDX98899 Canola peroxisome 61.45 61.45
CDY31776 Canola cytosol, peroxisome, plastid 63.36 61.25
CDX97893 Canola mitochondrion 63.36 61.25
CDY09823 Canola peroxisome 63.36 61.25
CDY09824 Canola mitochondrion 63.36 61.25
CDY04977 Canola peroxisome 60.69 60.46
KRH24731 Soybean nucleus 61.45 60.3
CDX70101 Canola peroxisome 59.92 59.92
VIT_06s0004g05370.t01 Wine grape peroxisome 57.63 59.92
CDY14094 Canola peroxisome 59.92 59.7
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 61.45 59.63
VIT_06s0004g05400.t01 Wine grape cytosol 25.19 59.46
VIT_06s0004g05330.t01 Wine grape peroxisome 57.63 59.45
CDY16436 Canola endoplasmic reticulum, vacuole 23.66 59.05
CDY04975 Canola mitochondrion 25.19 58.93
KRH24733 Soybean nucleus 59.16 58.49
VIT_06s0004g05310.t01 Wine grape cytosol 24.81 57.52
VIT_06s0004g05440.t01 Wine grape cytosol 17.94 57.32
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 58.78 57.25
CDY51372 Canola plastid 60.31 56.63
CDX95750 Canola cytosol 59.16 56.57
CDY35991 Canola plastid 26.72 56.45
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 50.0 54.58
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 50.38 53.66
VIT_06s0004g05450.t01 Wine grape plasma membrane 36.26 52.78
CDY72061 Canola cytosol 21.76 52.29
KRH29740 Soybean cytosol 18.32 48.98
CDX98898 Canola cytosol, peroxisome, plasma membrane 56.49 47.74
CDX97890 Canola cytosol 60.31 46.61
GSMUA_Achr5P04570_001 Banana cytosol 21.76 44.88
CDY65683 Canola cytosol, mitochondrion 66.79 43.86
CDY35231 Canola peroxisome 17.94 37.9
CDY31767 Canola plastid 74.05 34.46
CDX94534 Canola peroxisome 31.68 32.55
CDY16690 Canola peroxisome 31.3 32.16
CDX76382 Canola cytosol, mitochondrion, peroxisome 29.77 30.35
CDY27447 Canola cytosol, mitochondrion, peroxisome 29.77 30.23
CDY50145 Canola plastid 80.15 29.01
CDY43488 Canola cytosol 28.24 25.61
CDY27781 Canola cytosol, peroxisome, plastid 27.48 24.91
CDY17559 Canola cytoskeleton, nucleus, peroxisome 27.1 24.74
CDY05152 Canola cytosol 20.99 23.01
CDY08402 Canola cytosol 25.19 22.45
CDX73802 Canola peroxisome 24.81 21.81
CDY00799 Canola peroxisome 24.43 21.48
CDY05153 Canola cytosol, nucleus, plastid 4.96 18.57
Protein Annotations
EnsemblPlants:CDY40175EnsemblPlantsGene:GSBRNA2T00069307001Gene3D:3.40.50.720GO:A0A078HNR1InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR42898PANTHER:PTHR42898:SF7PFAM:PF13561PRINTS:PR00080PRINTS:PR00081ProteinID:CDY40175
ProteinID:CDY40175.1SUPFAM:SSF51735UniParc:UPI0004EF32ECUniProt:A0A078HNR1MapMan:50.1.1:
Description
BnaC04g14030DBnaC04g14030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNR1]
Coordinates
chrLK032465:+:116420..118316
Molecular Weight (calculated)
27989.8 Da
IEP (calculated)
6.888
GRAVY (calculated)
0.177
Length
262 amino acids
Sequence
(BLAST)
001: MDKRWSLQGM AALVTGGASG IGHAIVEELA CFGARIYVCD ISEILLNQSL IEWEKKGFPV SGSICDVSSR PARETLMQTV SMMFDGKLNI LVNNVGGLRT
101: KPTTEYLADD FSFHISTNLE SAYHLSQLSH PLLKASGFGS IVFISSVAGV VSMEGGSIYC LTKGAINQLA RNLACEWARD DIRANAVAPN FIQTAMAQPL
201: LGNAGYKKSL FNRTPLGRAG EPKEVASLVA FLCLPAASYI TGQTICVDGG LTVNGLSYQQ QA
Best Arabidopsis Sequence Match ( AT2G30670.1 )
(BLAST)
001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA
Arabidopsis Description
Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.