Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 96.9 | 97.28 |
| CDY35231 | Canola | peroxisome | 42.25 | 87.9 |
| CDY16690 | Canola | peroxisome | 84.11 | 85.1 |
| CDX94534 | Canola | peroxisome | 84.11 | 85.1 |
| KRH02005 | Soybean | endoplasmic reticulum, nucleus | 71.71 | 73.41 |
| KRH36525 | Soybean | endoplasmic reticulum | 71.32 | 72.16 |
| KRH11511 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole | 70.93 | 71.76 |
| Solyc04g014670.2.1 | Tomato | plastid | 70.16 | 71.54 |
| PGSC0003DMT400034518 | Potato | peroxisome | 70.16 | 71.26 |
| Zm00001d019439_P001 | Maize | extracellular | 66.28 | 67.59 |
| EER98384 | Sorghum | peroxisome | 65.5 | 66.8 |
| TraesCS5D01G169300.1 | Wheat | peroxisome | 65.12 | 66.4 |
| EES19901 | Sorghum | peroxisome | 64.73 | 66.01 |
| GSMUA_Achr3P01040_001 | Banana | cytosol | 24.42 | 65.62 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 64.34 | 65.61 |
| HORVU0Hr1G012410.1 | Barley | peroxisome | 64.34 | 65.61 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 63.95 | 65.22 |
| Os09t0133200-01 | Rice | peroxisome | 62.79 | 64.03 |
| GSMUA_Achr3P01030_001 | Banana | mitochondrion | 51.16 | 59.73 |
| Zm00001d038897_P001 | Maize | peroxisome | 63.95 | 59.14 |
| KRH70902 | Soybean | cytosol | 23.26 | 54.55 |
| HORVU5Hr1G049670.1 | Barley | peroxisome | 47.67 | 48.62 |
| CDX70101 | Canola | peroxisome | 34.11 | 33.59 |
| CDX98899 | Canola | peroxisome | 32.56 | 32.06 |
| CDY04977 | Canola | peroxisome | 32.56 | 31.94 |
| CDY14094 | Canola | peroxisome | 31.78 | 31.18 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 12.4 | 30.48 |
| CDY40186 | Canola | cytosol | 24.42 | 30.43 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 30.62 | 30.15 |
| CDY40183 | Canola | plastid | 30.62 | 30.15 |
| CDY09917 | Canola | cytosol | 30.62 | 30.15 |
| CDY40175 | Canola | plasma membrane | 30.23 | 29.77 |
| CDY06260 | Canola | plastid | 30.23 | 29.77 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 30.23 | 29.77 |
| CDY16437 | Canola | mitochondrion | 30.62 | 29.7 |
| CDX83307 | Canola | peroxisome | 29.84 | 29.39 |
| CDY06706 | Canola | mitochondrion | 30.23 | 29.32 |
| CDY52942 | Canola | mitochondrion | 30.23 | 29.32 |
| CDY14610 | Canola | mitochondrion | 30.23 | 29.32 |
| CDY10276 | Canola | mitochondrion | 30.23 | 29.32 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 29.84 | 29.28 |
| CDY35991 | Canola | plastid | 13.95 | 29.03 |
| CDX95751 | Canola | peroxisome | 29.46 | 29.01 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 29.46 | 29.01 |
| CDX83306 | Canola | plastid | 29.46 | 29.01 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 29.46 | 29.01 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 29.46 | 29.01 |
| CDY31774 | Canola | cytosol | 26.36 | 28.94 |
| CDX97893 | Canola | mitochondrion | 30.23 | 28.78 |
| CDY09823 | Canola | peroxisome | 30.23 | 28.78 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 30.23 | 28.78 |
| CDY09824 | Canola | mitochondrion | 30.23 | 28.78 |
| CDY45432 | Canola | cytosol | 29.07 | 28.63 |
| CDX97899 | Canola | peroxisome | 29.07 | 28.63 |
| CDY31773 | Canola | plastid | 29.07 | 28.63 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 29.07 | 28.63 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 29.07 | 28.63 |
| CDY04975 | Canola | mitochondrion | 12.4 | 28.57 |
| CDX97895 | Canola | cytosol | 25.97 | 28.51 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 28.68 | 28.24 |
| CDY40185 | Canola | plastid | 28.68 | 28.24 |
| CDY40165 | Canola | plastid | 28.29 | 27.86 |
| CDX95750 | Canola | cytosol | 29.46 | 27.74 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 27.91 | 27.59 |
| CDY45438 | Canola | cytosol | 27.91 | 27.48 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 27.91 | 27.48 |
| CDY68057 | Canola | cytosol | 27.91 | 27.48 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 32.95 | 27.42 |
| CDY40171 | Canola | cytosol | 23.26 | 27.15 |
| CDY64214 | Canola | mitochondrion | 17.83 | 26.9 |
| CDX97897 | Canola | cytosol, extracellular | 24.03 | 26.84 |
| CDY31770 | Canola | plastid | 24.03 | 26.72 |
| CDY72061 | Canola | cytosol | 11.24 | 26.61 |
| CDY51372 | Canola | plastid | 28.68 | 26.52 |
| CDX95752 | Canola | cytosol | 23.64 | 25.63 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.68 | 25.61 |
| CDY45441 | Canola | cytosol | 22.09 | 25.45 |
| CDY45433 | Canola | cytosol | 24.03 | 25.31 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.36 | 23.69 |
| CDY43488 | Canola | cytosol | 26.36 | 23.53 |
| CDX73802 | Canola | peroxisome | 27.13 | 23.49 |
| CDY00799 | Canola | peroxisome | 26.74 | 23.15 |
| CDY40177 | Canola | cytosol | 24.42 | 22.74 |
| CDY08402 | Canola | cytosol | 25.58 | 22.45 |
| CDX97890 | Canola | cytosol | 28.29 | 21.53 |
| CDY05152 | Canola | cytosol | 19.77 | 21.34 |
| CDY65683 | Canola | cytosol, mitochondrion | 30.62 | 19.8 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 5.04 | 18.57 |
| VIT_00s0516g00030.t01 | Wine grape | cytosol, peroxisome | 69.77 | 17.49 |
| CDY31767 | Canola | plastid | 31.78 | 14.56 |
| CDY50145 | Canola | plastid | 29.07 | 10.36 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078GQG9 | UniProt:A0A078GQG9 | EnsemblPlants:CDY27447 | ProteinID:CDY27447 |
| ProteinID:CDY27447.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00037439001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00081 | ScanProsite:PS00061 |
| PANTHER:PTHR43943 | PANTHER:PTHR43943:SF2 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI0004EDEA50 |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g64870DBnaC03g64870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQG9]
Coordinates
chrLK032204:+:460944..462688
Molecular Weight (calculated)
27539.5 Da
IEP (calculated)
9.870
GRAVY (calculated)
0.034
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKKKVGPK RLQGKVAIVT ASTQGIGFGI VERLGLEGAS VVVSSRKQKN VDEAVEKLKA QEIDAFGIVC HVSNAQHRLN LVQKTIQRYG KKIDIVVCNA
101: AVNPSTDPIL STQESALDKL WEVNVKSSIL LLQDMAPHLQ KGSSVIFITS IAAFQPQVPT AMYGVTKTAL LGLTKALAAE MGPDTRVNAV APGVVPTHFA
201: SFITRNSEVR RASEEKTLLN RLGTTEDMAA ATAFLASDDA AYITGETLVV AGGMPSRL
101: AVNPSTDPIL STQESALDKL WEVNVKSSIL LLQDMAPHLQ KGSSVIFITS IAAFQPQVPT AMYGVTKTAL LGLTKALAAE MGPDTRVNAV APGVVPTHFA
201: SFITRNSEVR RASEEKTLLN RLGTTEDMAA ATAFLASDDA AYITGETLVV AGGMPSRL
001: MEKKLPRRLE GKVAIVTAST QGIGFGITER FGLEGASVVV SSRKQANVDE AVAKLKSKGI DAYGIVCHVS NAQHRRNLVE KTVQKYGKID IVVCNAAANP
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
101: STDPILSSKE AVLDKLWEIN VKSSILLLQD MAPHLEKGSS VIFITSIAGF SPQGAMAMYG VTKTALLGLT KALAAEMAPD TRVNAVAPGF VPTHFASFIT
201: GSSEVREGIE EKTLLNRLGT TGDMAAAAAF LASDDSSYIT GETLVVAGGM PSRL
Arabidopsis Description
SDRAShort-chain dehydrogenase/reductase SDRA [Source:UniProtKB/Swiss-Prot;Acc:Q9S9W2]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.