Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G07450.1 | CDX83307 | AT2G29320.1 | 21798944 |
| AT1G07450.1 | CDX95751 | AT2G29320.1 | 21798944 |
| AT1G07450.1 | CDX97890 | AT2G29350.1 | 21798944 |
| AT1G07450.1 | CDY51372 | AT2G29350.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031575.1-P | Field mustard | plastid | 99.62 | 99.62 |
| CDY09917 | Canola | cytosol | 97.33 | 97.33 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 84.35 | 85.0 |
| CDY68057 | Canola | cytosol | 79.39 | 79.39 |
| CDX86486 | Canola | cytosol, peroxisome, plastid | 79.01 | 79.01 |
| CDX86485 | Canola | cytosol, peroxisome, plastid | 76.72 | 76.72 |
| CDX83306 | Canola | plastid | 71.37 | 71.37 |
| CDX95753 | Canola | cytosol, peroxisome, plastid | 70.61 | 70.61 |
| CDY40186 | Canola | cytosol | 55.34 | 70.05 |
| CDY40179 | Canola | cytosol, peroxisome, plastid | 69.08 | 69.35 |
| CDY31773 | Canola | plastid | 69.08 | 69.08 |
| CDY45438 | Canola | cytosol | 69.08 | 69.08 |
| CDY31768 | Canola | cytosol, peroxisome, plastid | 68.7 | 68.7 |
| CDY45432 | Canola | cytosol | 68.32 | 68.32 |
| CDY40165 | Canola | plastid | 67.56 | 67.56 |
| CDY31772 | Canola | cytosol, peroxisome, plastid | 67.56 | 67.56 |
| CDY40188 | Canola | cytosol, peroxisome, plasma membrane | 67.56 | 67.56 |
| CDX83307 | Canola | peroxisome | 67.56 | 67.56 |
| CDY45441 | Canola | cytosol | 57.63 | 67.41 |
| CDY62820 | Canola | cytosol, endoplasmic reticulum, peroxisome | 67.18 | 66.92 |
| CDY45435 | Canola | cytosol, peroxisome, plastid | 66.79 | 66.79 |
| CDX97899 | Canola | peroxisome | 66.79 | 66.79 |
| CDX95751 | Canola | peroxisome | 66.79 | 66.79 |
| CDY40182 | Canola | cytosol, peroxisome, plastid | 66.79 | 66.79 |
| CDX97897 | Canola | cytosol, extracellular | 58.78 | 66.67 |
| CDY06706 | Canola | mitochondrion | 67.56 | 66.54 |
| CDY52942 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY10276 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY14610 | Canola | mitochondrion | 67.18 | 66.17 |
| CDY40183 | Canola | plastid | 66.03 | 66.03 |
| CDY45434 | Canola | cytosol, nucleus, plastid | 66.03 | 66.03 |
| CDY16437 | Canola | mitochondrion | 66.79 | 65.79 |
| CDY40175 | Canola | plasma membrane | 65.65 | 65.65 |
| CDY31774 | Canola | cytosol | 58.78 | 65.53 |
| CDX98899 | Canola | peroxisome | 65.27 | 65.27 |
| CDX97895 | Canola | cytosol | 58.4 | 65.11 |
| CDY40185 | Canola | plastid | 64.89 | 64.89 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 62.21 | 64.68 |
| CDY64214 | Canola | mitochondrion | 41.98 | 64.33 |
| CDY04977 | Canola | peroxisome | 64.5 | 64.26 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 27.1 | 63.96 |
| CDY14094 | Canola | peroxisome | 63.74 | 63.5 |
| CDY04975 | Canola | mitochondrion | 27.1 | 63.39 |
| CDY09823 | Canola | peroxisome | 65.27 | 63.1 |
| Solyc03g096650.1.1 | Tomato | cytosol | 21.37 | 62.92 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 27.1 | 62.83 |
| CDY31776 | Canola | cytosol, peroxisome, plastid | 64.89 | 62.73 |
| CDY09824 | Canola | mitochondrion | 64.89 | 62.73 |
| CDX97893 | Canola | mitochondrion | 64.89 | 62.73 |
| CDX70101 | Canola | peroxisome | 62.6 | 62.6 |
| CDY45433 | Canola | cytosol | 58.4 | 62.45 |
| CDY31770 | Canola | plastid | 54.58 | 61.64 |
| CDY40171 | Canola | cytosol | 51.91 | 61.54 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 63.36 | 61.48 |
| CDY72061 | Canola | cytosol | 25.57 | 61.47 |
| KRH24731 | Soybean | nucleus | 62.6 | 61.42 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 58.78 | 61.11 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 19.08 | 60.98 |
| CDY16436 | Canola | endoplasmic reticulum, vacuole | 24.43 | 60.95 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 62.6 | 60.74 |
| KRH24733 | Soybean | nucleus | 60.31 | 59.62 |
| CDX95750 | Canola | cytosol | 62.21 | 59.49 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 57.25 | 59.06 |
| CDX95752 | Canola | cytosol | 53.44 | 58.82 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 59.92 | 58.36 |
| CDY51372 | Canola | plastid | 61.45 | 57.71 |
| CDY40177 | Canola | cytosol | 59.54 | 56.32 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 50.76 | 55.42 |
| KRH29740 | Soybean | cytosol | 19.85 | 53.06 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.24 | 52.44 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 35.5 | 51.67 |
| CDY35991 | Canola | plastid | 24.05 | 50.81 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 58.4 | 49.35 |
| CDX97890 | Canola | cytosol | 61.45 | 47.49 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 22.9 | 47.24 |
| CDY65683 | Canola | cytosol, mitochondrion | 68.32 | 44.86 |
| CDY35231 | Canola | peroxisome | 16.41 | 34.68 |
| CDY31767 | Canola | plastid | 69.08 | 32.15 |
| CDY16690 | Canola | peroxisome | 30.53 | 31.37 |
| CDX94534 | Canola | peroxisome | 30.53 | 31.37 |
| CDX76382 | Canola | cytosol, mitochondrion, peroxisome | 29.77 | 30.35 |
| CDY27447 | Canola | cytosol, mitochondrion, peroxisome | 29.77 | 30.23 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 28.24 | 25.61 |
| CDY43488 | Canola | cytosol | 27.86 | 25.26 |
| CDY50145 | Canola | plastid | 68.32 | 24.72 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 26.72 | 24.39 |
| CDY05152 | Canola | cytosol | 21.76 | 23.85 |
| CDY00799 | Canola | peroxisome | 24.43 | 21.48 |
| CDX73802 | Canola | peroxisome | 24.43 | 21.48 |
| CDY08402 | Canola | cytosol | 24.05 | 21.43 |
| CDY05153 | Canola | cytosol, nucleus, plastid | 4.2 | 15.71 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:50.1.1 | GO:A0A078EW33 | EnsemblPlants:CDY06260 | ProteinID:CDY06260 | ProteinID:CDY06260.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | EnsemblPlantsGene:GSBRNA2T00122178001 |
| InterPro:NAD(P)-bd_dom_sf | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF7 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI0004EEC11C | SEG:seg |
Description
BnaA09g49430D
Coordinates
chrLK031968:-:511154..512335
Molecular Weight (calculated)
28249.9 Da
IEP (calculated)
6.733
GRAVY (calculated)
0.098
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MDINRWSLQC MTALVTGGTK GIGYAIVEEL ASFGARVHTC DIDQTSLDEC LSEWQRKGFQ VSGSICDVTS RPQRDQLMQT VSSLFGSKLN ILVNNVGKFM
101: LKPTLESTAE DFSSLMSTNL ESAYHISQLA HPLLKVSGNG IIIFISSVSG IVSGTASVYG ATKGAMNQLG RNLACEWASD GIRVNSVAPW VTATSLVKKY
201: LDDKKFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICVDGG FTVNGFSYKP EV
101: LKPTLESTAE DFSSLMSTNL ESAYHISQLA HPLLKVSGNG IIIFISSVSG IVSGTASVYG ATKGAMNQLG RNLACEWASD GIRVNSVAPW VTATSLVKKY
201: LDDKKFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICVDGG FTVNGFSYKP EV
001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
Arabidopsis Description
Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.