Factsheet for Bra031575.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra039513.1-P
Bra039977.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07450.1	Bra039513.1-P	AT2G29320.1	21798944
AT1G07450.1	Bra039977.1-P	AT2G29350.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06260	Canola	plastid	99.62	99.62
AT1G07450.1	Thale cress	cytosol, nucleus, peroxisome	84.35	85.0
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	78.63	78.63
Bra000477.1-P	Field mustard	plastid	71.76	71.76
Bra039973.1-P	Field mustard	plastid	69.85	69.85
Bra018393.1-P	Field mustard	cytosol	69.85	69.85
Bra018396.1-P	Field mustard	cytosol	69.47	69.47
Bra039967.1-P	Field mustard	plastid	68.7	68.7
Bra039513.1-P	Field mustard	peroxisome	68.32	68.32
Bra018404.1-P	Field mustard	cytosol	48.47	68.28
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	67.56	67.56
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	67.18	67.18
Bra018405.1-P	Field mustard	cytosol	67.18	67.18
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	67.18	67.18
Bra039969.1-P	Field mustard	cytosol	67.18	66.92
Bra015580.1-P	Field mustard	mitochondrion	67.94	66.92
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.79	66.79
Bra018402.1-P	Field mustard	cytosol	55.73	66.67
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	66.79	66.54
Bra018391.1-P	Field mustard	cytosol	66.41	66.41
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	66.03	66.03
Bra039755.1-P	Field mustard	mitochondrion	66.79	65.79
Bra018401.1-P	Field mustard	cytosol	63.36	65.61
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	62.6	65.08
Bra028744.1-P	Field mustard	cytosol	64.5	64.26
Bra027962.1-P	Field mustard	cytosol	42.37	64.16
VIT_06s0004g05400.t01	Wine grape	cytosol	27.1	63.96
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	62.98	62.98
Solyc03g096650.1.1	Tomato	cytosol	21.37	62.92
VIT_06s0004g05310.t01	Wine grape	cytosol	27.1	62.83
Bra039976.1-P	Field mustard	cytosol	64.89	62.73
VIT_06s0004g05380.t01	Wine grape	plastid	63.74	61.85
VIT_06s0004g05370.t01	Wine grape	peroxisome	59.16	61.51
Bra039966.1-P	Field mustard	cytosol	67.56	61.46
KRH24731	Soybean	nucleus	62.6	61.42
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	62.98	61.11
VIT_06s0004g05440.t01	Wine grape	cytosol	19.08	60.98
KRH24733	Soybean	nucleus	60.69	60.0
VIT_06s0004g05330.t01	Wine grape	peroxisome	57.63	59.45
Bra039977.1-P	Field mustard	plastid	43.13	58.55
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	59.92	58.36
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	51.15	55.83
KRH29740	Soybean	cytosol	19.85	53.06
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	49.62	52.85
VIT_06s0004g05450.t01	Wine grape	plasma membrane	35.88	52.22
Bra027961.1-P	Field mustard	cytosol	59.92	51.82
GSMUA_Achr5P04570_001	Banana	cytosol	22.9	47.24
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.1	43.56
Bra029476.1-P	Field mustard	peroxisome	30.92	31.76
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	30.15	30.74
Bra021324.1-P	Field mustard	cytosol	28.24	25.61
Bra034728.1-P	Field mustard	cytosol	24.43	21.77
Bra001471.1-P	Field mustard	peroxisome	24.43	21.48

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EnsemblPlantsGene:Bra031575	EnsemblPlants:Bra031575.1	EnsemblPlants:Bra031575.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:M4ERZ7
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF7	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00025433E2	SEG:seg

Description

AT1G07450 (E=3e-117) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA09:+:35753163..35754345

Molecular Weight (calculated)

28223.8 Da

IEP (calculated)

6.733

GRAVY (calculated)

0.077

Length

262 amino acids

Sequence
(BLAST)

001: MDINRWSLQC MTALVTGGTK GIGYAIVEEL ASFGARVHTC DIDQTSLDEC LSEWQRKGFQ VSGSICDVTS RPQRDQLMQT VSSLFGSKLN ILVNNVGKFM
101: LKPTLESTAE DFSSLMSTNL ESAYHISQLA HPLLKVSGNG SIIFISSVSG IVSGTASVYG ATKGAMNQLG RNLACEWASD GIRVNSVAPW VTATSLVKKY
201: LDDKKFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICVDGG FTVNGFSYKP EV

Best Arabidopsis Sequence Match ( AT1G07450.1 )
(BLAST)

001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP

Arabidopsis Description

Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.