Factsheet for Bra021324.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43488	Canola	cytosol	99.65	99.65
AT1G54870.2	Thale cress	plastid	94.12	80.71
KRG92837	Soybean	endoplasmic reticulum, nucleus	79.93	78.84
KRH33956	Soybean	endoplasmic reticulum	79.24	78.16
GSMUA_Achr4P24690_001	Banana	cytosol	68.51	66.44
GSMUA_Achr4P29030_001	Banana	cytosol	63.32	62.67
OQU77380	Sorghum	mitochondrion	67.82	59.94
TraesCS1A01G083800.1	Wheat	plastid	70.93	59.08
TraesCS1D01G084900.1	Wheat	mitochondrion, plastid	70.24	58.5
TraesCS1B01G101100.1	Wheat	plastid	70.24	58.33
Os05t0140800-01	Rice	plastid	68.86	54.52
Zm00001d006796_P001	Maize	extracellular	65.74	53.07
HORVU1Hr1G018140.5	Barley	extracellular, mitochondrion	70.59	51.13
Bra018404.1-P	Field mustard	cytosol	20.42	31.72
Bra015580.1-P	Field mustard	mitochondrion	28.37	30.83
Bra028744.1-P	Field mustard	cytosol	27.34	30.04
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	26.99	29.77
Bra018405.1-P	Field mustard	cytosol	26.64	29.39
Bra018402.1-P	Field mustard	cytosol	22.15	29.22
Bra039976.1-P	Field mustard	cytosol	27.34	29.15
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	26.3	29.01
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	26.3	29.01
Bra018393.1-P	Field mustard	cytosol	26.3	29.01
Bra039755.1-P	Field mustard	mitochondrion	26.64	28.95
Bra039977.1-P	Field mustard	plastid	19.03	28.5
Bra018391.1-P	Field mustard	cytosol	25.61	28.24
Bra000477.1-P	Field mustard	plastid	25.61	28.24
Bra039973.1-P	Field mustard	plastid	25.61	28.24
Bra031575.1-P	Field mustard	plastid	25.61	28.24
Bra018396.1-P	Field mustard	cytosol	25.61	28.24
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	25.61	28.24
Bra029476.1-P	Field mustard	peroxisome	24.91	28.24
Bra001471.1-P	Field mustard	peroxisome	29.07	28.19
Bra039969.1-P	Field mustard	cytosol	25.61	28.14
Bra018401.1-P	Field mustard	cytosol	24.57	28.06
Bra039513.1-P	Field mustard	peroxisome	25.26	27.86
Bra039967.1-P	Field mustard	plastid	24.91	27.48
Bra034728.1-P	Field mustard	cytosol	27.68	27.21
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	24.57	27.1
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	24.57	27.1
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	23.53	26.46
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	23.88	26.34
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	23.88	26.24
Bra039966.1-P	Field mustard	cytosol	24.91	25.0
Bra027962.1-P	Field mustard	cytosol	14.88	24.86
Bra027961.1-P	Field mustard	cytosol	21.45	20.46
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	11.07	19.63

Protein Annotations

EnsemblPlants:Bra021324.1	EnsemblPlants:Bra021324.1-P	EnsemblPlantsGene:Bra021324	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR43348	PANTHER:PTHR43348:SF4	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	SUPFAM:SSF51735	UniParc:UPI0002545074	UniProt:M4DXS8	MapMan:35.1	:

Description

AT1G54870 (E=3e-155) | binding / catalytic/ oxidoreductase

Coordinates

chrA01:+:26271118..26272415

Molecular Weight (calculated)

31480.3 Da

IEP (calculated)

6.517

GRAVY (calculated)

-0.276

Length

289 amino acids

Sequence
(BLAST)

001: MASERQKQGG VQPGKEHVMD PTPQFSSSDY QPSNKLRGKV ALITGGDSGI GRAVSYCFAV EGATVAFTYV KGQEEKDAQE TLQMLKEAKT SEAKDPIAIP
101: TDLGFDENCK RVVDEVVNAF GRIDVLINNA AEQYESNSIE EIDEPRLERV FRTNIFSYFF LTRHALKHMK EGSSIINTTS VNAYKGHASL LDYTATKGAI
201: VAFTRGLALQ LAEKGIRVNG VAPGPIWTPL IPASFNEEKI KNFGTEVPMK RAGQPIEVAP SYVFLACNHC SSYFTGQVLH PNGGAVVNA

Best Arabidopsis Sequence Match ( AT1G54870.1 )
(BLAST)

001: MNVLCRVFTS SRVLSSNVTF SFSQIPNNTK KPLLEKRRLS PRVCLRAMAS EKQKQHAQPG KEHVMESSPQ FSSSDYQPSN KLRGKVALIT GGDSGIGRAV
101: GYCFASEGAT VAFTYVKGQE EKDAQETLQM LKEVKTSDSK EPIAIPTDLG FDENCKRVVD EVVNAFGRID VLINNAAEQY ESSTIEEIDE PRLERVFRTN
201: IFSYFFLTRH ALKHMKEGSS IINTTSVNAY KGNASLLDYT ATKGAIVAFT RGLALQLAEK GIRVNGVAPG PIWTPLIPAS FNEEKIKNFG SEVPMKRAGQ
301: PIEVAPSYVF LACNHCSSYF TGQVLHPNGG AVVNA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.