Factsheet for Bra027961.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039755.1-P	Field mustard	mitochondrion	67.33	76.69
Bra027962.1-P	Field mustard	cytosol	43.23	75.72
Bra018404.1-P	Field mustard	cytosol	42.24	68.82
Bra015580.1-P	Field mustard	mitochondrion	60.4	68.8
Bra018402.1-P	Field mustard	cytosol	48.18	66.67
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	53.14	61.45
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	52.81	61.07
Bra018405.1-P	Field mustard	cytosol	52.81	61.07
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.81	61.07
Bra018393.1-P	Field mustard	cytosol	52.48	60.69
Bra018396.1-P	Field mustard	cytosol	52.15	60.31
Bra018401.1-P	Field mustard	cytosol	50.16	60.08
Bra031575.1-P	Field mustard	plastid	51.82	59.92
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	51.16	59.16
Bra039967.1-P	Field mustard	plastid	51.16	59.16
Bra039969.1-P	Field mustard	cytosol	51.16	58.94
Bra039973.1-P	Field mustard	plastid	50.83	58.78
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	50.83	58.78
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	50.83	58.78
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	50.83	58.56
Bra039513.1-P	Field mustard	peroxisome	50.49	58.4
Bra018391.1-P	Field mustard	cytosol	50.16	58.02
Bra000477.1-P	Field mustard	plastid	50.16	58.02
Bra039977.1-P	Field mustard	plastid	36.3	56.99
Bra039966.1-P	Field mustard	cytosol	53.47	56.25
Bra039976.1-P	Field mustard	cytosol	50.16	56.09
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	46.53	55.95
CDY65683	Canola	cytosol, mitochondrion	73.27	55.64
VIT_06s0004g05330.t01	Wine grape	peroxisome	45.87	54.72
VIT_06s0004g05370.t01	Wine grape	peroxisome	45.21	54.37
KRH24731	Soybean	nucleus	47.52	53.93
VIT_06s0004g05380.t01	Wine grape	plastid	46.86	52.59
Bra028744.1-P	Field mustard	cytosol	45.54	52.47
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	45.21	52.29
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	45.87	51.48
VIT_06s0004g05450.t01	Wine grape	plasma membrane	30.03	50.56
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	43.56	49.07
KRH24733	Soybean	nucleus	42.9	49.06
KRH29740	Soybean	cytosol	15.18	46.94
VIT_06s0004g05310.t01	Wine grape	cytosol	17.49	46.9
VIT_06s0004g05400.t01	Wine grape	cytosol	17.16	46.85
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	37.95	46.75
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	36.96	46.67
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	24.09	44.79
VIT_06s0004g05440.t01	Wine grape	cytosol	11.88	43.9
Solyc03g096650.1.1	Tomato	cytosol	12.87	43.82
GSMUA_Achr5P04570_001	Banana	cytosol	15.18	36.22
Bra029476.1-P	Field mustard	peroxisome	24.42	29.02
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	22.77	26.85
Bra021324.1-P	Field mustard	cytosol	20.46	21.45
Bra034728.1-P	Field mustard	cytosol	18.81	19.39
Bra001471.1-P	Field mustard	peroxisome	18.81	19.13

Protein Annotations

EnsemblPlants:Bra027961.1	EnsemblPlants:Bra027961.1-P	EnsemblPlantsGene:Bra027961	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
UniParc:UPI000254222C	UniProt:M4EGP7	MapMan:50.1.1	:	:	:

Description

AT1G07440 (E=2e-097) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA09:-:10150455..10153772

Molecular Weight (calculated)

32110.2 Da

IEP (calculated)

4.840

GRAVY (calculated)

0.150

Length

303 amino acids

Sequence
(BLAST)

001: MNQLARNLAC EWASDGIRAN AVAPTVIATP LAEAAFDDEF KKAVESTNPL GRLGKPEEVA SLVAFLCMPA ASYITGQTIC VDGDEAHLNE CLSGWKNKGF
101: QVTGSVCAAS SWTEREKLMQ TVSTLFDAKL SILINNVGAI RSKPTIENTA EDFSFHISTN LESAYHFSQL AHPLLKSSGC GNIVFISSIA GVVSCGVSSI
201: YSAIKGAMNQ LARNLACEWA SDGIRANAIA PAVIATPLVE YGFDDEFKKA MESINPLGRL GKPEEAASLV AFLCMPAASY ITGQTICVDG GLSINGFSYQ
301: PHA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.