Factsheet for Bra027962.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
peroxisome 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64214	Canola	mitochondrion	94.8	95.91
VIT_06s0004g05440.t01	Wine grape	cytosol	32.37	68.29
VIT_06s0004g05400.t01	Wine grape	cytosol	41.62	64.86
VIT_06s0004g05310.t01	Wine grape	cytosol	42.2	64.6
Solyc03g096650.1.1	Tomato	cytosol	30.06	58.43
Bra039755.1-P	Field mustard	mitochondrion	88.44	57.52
KRH29740	Soybean	cytosol	30.06	53.06
Bra015580.1-P	Field mustard	mitochondrion	76.88	50.0
GSMUA_Achr5P04570_001	Banana	cytosol	36.42	49.61
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	68.79	45.42
Bra018396.1-P	Field mustard	cytosol	67.05	44.27
Bra018391.1-P	Field mustard	cytosol	65.9	43.51
Bra027961.1-P	Field mustard	cytosol	75.72	43.23
Bra018393.1-P	Field mustard	cytosol	65.32	43.13
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	64.74	42.75
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	64.74	42.75
Bra031575.1-P	Field mustard	plastid	64.16	42.37
Bra039513.1-P	Field mustard	peroxisome	64.16	42.37
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	58.38	42.08
VIT_06s0004g05380.t01	Wine grape	plastid	65.32	41.85
Bra039969.1-P	Field mustard	cytosol	63.58	41.83
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	60.69	41.67
Bra000477.1-P	Field mustard	plastid	63.01	41.6
Bra018405.1-P	Field mustard	cytosol	63.01	41.6
Bra039973.1-P	Field mustard	plastid	63.01	41.6
Bra039974.1-P	Field mustard	cytosol, plasma membrane, plastid	63.01	41.44
Bra039967.1-P	Field mustard	plastid	62.43	41.22
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	64.16	41.11
Bra039976.1-P	Field mustard	cytosol	63.58	40.59
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	61.27	40.46
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	61.27	40.46
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	61.27	40.46
KRH24731	Soybean	nucleus	62.43	40.45
Bra018401.1-P	Field mustard	cytosol	58.38	39.92
VIT_06s0004g05370.t01	Wine grape	peroxisome	57.8	39.68
Bra028744.1-P	Field mustard	cytosol	60.12	39.54
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	59.54	39.31
KRH24733	Soybean	nucleus	58.38	38.11
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	53.76	37.8
VIT_06s0004g05330.t01	Wine grape	peroxisome	54.91	37.4
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	57.23	36.8
Bra018402.1-P	Field mustard	cytosol	46.24	36.53
Bra039966.1-P	Field mustard	cytosol	60.12	36.11
Bra018404.1-P	Field mustard	cytosol	34.68	32.26
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	28.32	30.06
Bra039977.1-P	Field mustard	plastid	32.95	29.53
VIT_06s0004g05450.t01	Wine grape	plasma membrane	24.86	23.89
Bra029476.1-P	Field mustard	peroxisome	30.64	20.78
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	27.17	18.29
Bra021324.1-P	Field mustard	cytosol	24.86	14.88
Bra034728.1-P	Field mustard	cytosol	24.28	14.29
Bra001471.1-P	Field mustard	peroxisome	23.12	13.42

Protein Annotations

EnsemblPlants:Bra027962.1	EnsemblPlants:Bra027962.1-P	EnsemblPlantsGene:Bra027962	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF00106	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
UniParc:UPI000254222D	UniProt:M4EGP8	MapMan:50.1.1	:	:	:

Description

AT1G07440 (E=2e-065) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA09:-:10159478..10161566

Molecular Weight (calculated)

18533.0 Da

IEP (calculated)

7.542

GRAVY (calculated)

-0.016

Length

173 amino acids

Sequence
(BLAST)

001: MAGEEQRGRW SLQGKTALVT GGTKGIGHGI VEELAGFGAI IHTCARDEAH LNECLSDWKK KGFQVTGSVC DASSWTEREK LMQTVSTLFD AKLSILINNV
101: GAIRSKPTIE NTAEDFSFHI STNLESAYHF SQLAHPLLKS SGCGNIVFIS SVAGVVSFGV SSIYCATKAH GRV

Best Arabidopsis Sequence Match ( AT1G07440.2 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGL YTNY

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.