Factsheet for Bra039974.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31774	Canola	cytosol	88.21	98.72
CDX97895	Canola	cytosol	87.83	98.3
Bra039969.1-P	Field mustard	cytosol	93.16	93.16
AT2G30670.1	Thale cress	cytosol, nucleus, peroxisome	85.17	85.5
Bra018393.1-P	Field mustard	cytosol	84.03	84.35
Bra018391.1-P	Field mustard	cytosol	82.89	83.21
Bra018396.1-P	Field mustard	cytosol	82.89	83.21
Bra018400.1-P	Field mustard	cytosol, nucleus, plastid	78.71	79.01
Bra039971.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	78.71	79.01
Bra039967.1-P	Field mustard	plastid	78.33	78.63
Bra039973.1-P	Field mustard	plastid	77.57	77.86
Bra039514.1-P	Field mustard	cytosol, peroxisome, plastid	76.81	77.1
Bra000476.1-P	Field mustard	cytosol, peroxisome, plastid	76.43	76.72
Bra000477.1-P	Field mustard	plastid	76.43	76.72
Bra018405.1-P	Field mustard	cytosol	76.43	76.72
Bra039513.1-P	Field mustard	peroxisome	75.67	75.95
Bra018401.1-P	Field mustard	cytosol	72.62	75.49
Bra018404.1-P	Field mustard	cytosol	52.85	74.73
Bra018402.1-P	Field mustard	cytosol	61.6	73.97
Bra018399.1-P	Field mustard	cytosol, peroxisome, plastid	72.24	72.52
Bra039966.1-P	Field mustard	cytosol	73.38	67.01
Bra030683.1-P	Field mustard	cytosol, mitochondrion, plastid	66.54	66.79
Bra031575.1-P	Field mustard	plastid	66.54	66.79
Bra015580.1-P	Field mustard	mitochondrion	66.54	65.79
Bra039755.1-P	Field mustard	mitochondrion	65.78	65.04
VIT_06s0004g05320.t01	Wine grape	endoplasmic reticulum, peroxisome, plastid	60.46	63.1
Bra027962.1-P	Field mustard	cytosol	41.44	63.01
VIT_06s0004g05380.t01	Wine grape	plastid	62.36	60.74
VIT_06s0004g05400.t01	Wine grape	cytosol	25.48	60.36
VIT_06s0004g05370.t01	Wine grape	peroxisome	57.79	60.32
Bra039976.1-P	Field mustard	cytosol	61.98	60.15
VIT_06s0004g05430.t01	Wine grape	mitochondrion, nucleus, peroxisome	61.6	60.0
Bra039977.1-P	Field mustard	plastid	43.73	59.59
Solyc03g096650.1.1	Tomato	cytosol	20.15	59.55
KRH24731	Soybean	nucleus	60.46	59.55
VIT_06s0004g05330.t01	Wine grape	peroxisome	57.41	59.45
Bra028744.1-P	Field mustard	cytosol	59.32	59.32
Bra009159.1-P	Field mustard	cytosol, mitochondrion, peroxisome, plasma membrane	58.94	59.16
KRH24733	Soybean	nucleus	58.94	58.49
VIT_06s0004g05310.t01	Wine grape	cytosol	25.1	58.41
VIT_06s0004g05440.t01	Wine grape	cytosol	17.87	57.32
KRH24732	Soybean	cytosol, endoplasmic reticulum, plastid	58.17	56.88
VIT_06s0004g05360.t01	Wine grape	cytosol, mitochondrion, plastid	49.81	54.58
VIT_06s0004g05390.t01	Wine grape	cytosol, plasma membrane, plastid	49.81	53.25
VIT_06s0004g05450.t01	Wine grape	plasma membrane	35.36	51.67
Bra027961.1-P	Field mustard	cytosol	58.56	50.83
KRH29740	Soybean	cytosol	18.63	50.0
GSMUA_Achr5P04570_001	Banana	cytosol	21.67	44.88
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	27.76	44.79
Bra029476.1-P	Field mustard	peroxisome	29.66	30.59
Bra020854.1-P	Field mustard	cytosol, mitochondrion, peroxisome	29.66	30.35
Bra021324.1-P	Field mustard	cytosol	26.24	23.88
Bra034728.1-P	Field mustard	cytosol	25.1	22.45
Bra001471.1-P	Field mustard	peroxisome	23.95	21.14

Protein Annotations

EnsemblPlants:Bra039974.1	EnsemblPlants:Bra039974.1-P	EnsemblPlantsGene:Bra039974	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR42898	PANTHER:PTHR42898:SF7	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002544235	UniProt:M4FFV0	MapMan:50.1.1	:	:

Description

AT2G30670 (E=1e-112) | tropinone reductase, putative / tropine dehydrogenase, putative

Coordinates

chrA04:+:13187950..13189480

Molecular Weight (calculated)

28187.7 Da

IEP (calculated)

6.234

GRAVY (calculated)

0.035

Length

263 amino acids

Sequence
(BLAST)

001: MDKRWSLEGM TALVTGGASG IGHAIVEELA SFRARIHVCD ISETLLNQSL SEWEKQGFQV SGSTCDVSSR PEREILMQTI SGIFDGKLNI LVNNVGVVHT
101: KPTTEYEADD FSFHISTNLE SAYHLSQLSH PLLKASGIGS IVMISSVGGV VSMCCGSIYS LAKGALNQLA KNLACEWARD GIRTNSVAPN FVNKTTMAKP
201: FFKDTGYEKS LLNRTPLGRA GEPNEVASLV AFLCLPAASY ITGQTICVDG GLTVNGFSYQ PNA

Best Arabidopsis Sequence Match ( AT2G30670.1 )
(BLAST)

001: MDKRWSLQGM TALVTGGASG IGHAIVEELA GLGARIYVCD ISETLLNQSL SEWEKKGFQV SGSICDVSSH SERETLMQTV SKMFDGKLNI LVNNVGVVNP
101: KPTIEYVAAD FSFSISTNLE SAYHLSQLSH PLLKASEFGS IIFISSVGGV VSMECGSIYS LTKGALNQLA KTLACEWARD GIRANSVAPN FIYTAMAQPF
201: FKDADYEKSL VSRTPLGRAG EPNEVSSLVA FLCLPAASYI TGQTICVDGG LTVNGFSYKP QA

Arabidopsis Description

Tropinone reductase homolog At2g30670 [Source:UniProtKB/Swiss-Prot;Acc:O49332]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.