CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006796_P001	Maize	extracellular	77.98	71.23
TraesCS1D01G084900.1	Wheat	mitochondrion, plastid	74.01	69.74
TraesCS1A01G083800.1	Wheat	plastid	74.01	69.74
TraesCS1B01G101100.1	Wheat	plastid	74.01	69.54
KRG92837	Soybean	endoplasmic reticulum, nucleus	62.08	69.28
KRH33956	Soybean	endoplasmic reticulum	61.16	68.26
CDY27781	Canola	cytosol, peroxisome, plastid	60.24	68.17
AT3G05260.1	Thale cress	cytosol	59.94	67.82
Bra021324.1-P	Field mustard	cytosol	59.94	67.82
CDY17559	Canola	cytoskeleton, nucleus, peroxisome	59.33	67.6
CDY43488	Canola	cytosol	59.63	67.47
PGSC0003DMT400073652	Potato	cytosol, peroxisome, plastid	59.63	66.55
Os05t0140800-01	Rice	plastid	73.09	65.48
GSMUA_Achr4P24690_001	Banana	cytosol	58.41	64.09
KRH68615	Soybean	cytosol, nucleus, plastid	43.12	63.8
KRG96884	Soybean	cytosol	56.27	62.37
KRH68572	Soybean	cytosol	56.57	61.67
GSMUA_Achr4P29030_001	Banana	cytosol	55.05	61.64
HORVU1Hr1G018140.5	Barley	extracellular, mitochondrion	74.62	61.15
KRH68573	Soybean	cytosol	51.38	61.09
VIT_14s0128g00340.t01	Wine grape	plastid	62.69	60.12
Solyc01g098850.2.1	Tomato	extracellular	61.16	58.82
AT1G54870.2	Thale cress	plastid	59.33	57.57
CDY05152	Canola	cytosol	39.45	53.97
KXG29040	Sorghum	cytosol, peroxisome, plastid	22.63	30.58
EES10198	Sorghum	mitochondrion, plastid	25.08	30.26
EER98384	Sorghum	peroxisome	23.24	30.04
EES10199	Sorghum	mitochondrion	24.16	29.7
KXG34055	Sorghum	plastid	25.08	29.6
KXG29038	Sorghum	mitochondrion, plastid	23.85	29.55
EES19901	Sorghum	peroxisome	22.63	29.25
EES10195	Sorghum	mitochondrion	23.55	29.17
OQU84126	Sorghum	peroxisome	25.08	28.87
OQU92858	Sorghum	cytosol, peroxisome, plastid	24.46	25.97
EES11417	Sorghum	peroxisome	23.24	25.59
EES11416	Sorghum	mitochondrion, peroxisome, plastid	23.24	25.59
EES08074	Sorghum	plastid	23.24	25.25
OQU91956	Sorghum	extracellular, peroxisome	18.04	18.44

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8071299	UniProt:A0A1Z5R0W2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlants:OQU77380
ProteinID:OQU77380	ProteinID:OQU77380.1	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR43348	PANTHER:PTHR43348:SF4	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3009G037100	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
SignalP:SignalP-noTM	UniParc:UPI0001A886D8	RefSeq:XP_002439250.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:3508205..3509672

Molecular Weight (calculated)

34921.6 Da

IEP (calculated)

9.272

GRAVY (calculated)

-0.205

Length

327 amino acids

Sequence
(BLAST)

001: MRAALLRLLH LPVVASRSPS SPLRPAPAAR AMASQKQFPP QQQGSQPGKE HAMDPRPEAI LQNYKAANKL KNKVALVTGG DSGIGRAVCL LFAAEGASVA
101: FTYVKGHEDK DAEETLRALR DISSRTGARP PMALAADLGY EDSCRSVVEE VASAHGGRID VLVNNAAEQH ERRSITEVAE PDLDRVFRTN IFSYFLTTKH
201: AVARMAPHGG GSVINTASVN AYKGHKTLLD YTSTKGAIVS FTRALALQLA DKGIRVNGVA PGPIWTPLIP ASFGEEKVEQ FGSEVPMKRA GQPAEVAPSY
301: VFLASEQDSS YITGQFLHVN GGVIVNG

Best Arabidopsis Sequence Match ( AT1G54870.2 )
(BLAST)

001: MAMNVLCRVF TSSRVLSSNV TFSFSQIPNN TKKPLLEKRR LSPRVCLRAM ASEKQKQHAQ PGKEHVMESS PQFSSSDYQP SNKLRGKVAL ITGGDSGIGR
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.