CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10195	Sorghum	mitochondrion	92.8	92.8
TraesCS3B01G434900.1	Wheat	cytosol, mitochondrion, plastid	25.76	77.27
TraesCS1A01G383700.1	Wheat	cytosol, extracellular, plastid	41.67	72.37
TraesCS3A01G401900.1	Wheat	extracellular, mitochondrion, plastid	71.59	71.86
TraesCS3D01G396800.1	Wheat	extracellular, mitochondrion, plastid	71.21	71.48
HORVU1Hr1G084560.2	Barley	extracellular, mitochondrion, plastid	70.83	71.1
EES10199	Sorghum	mitochondrion	71.59	71.05
TraesCS1B01G419000.1	Wheat	mitochondrion, plastid	48.86	70.88
TraesCS1A01G390900.1	Wheat	mitochondrion, plastid	69.32	70.66
TraesCS3D01G396900.1	Wheat	mitochondrion, plastid	70.08	70.34
KXG29040	Sorghum	cytosol, peroxisome, plastid	64.02	69.83
Zm00001d048726_P001	Maize	cytosol	59.09	69.64
TraesCS3A01G402000.1	Wheat	mitochondrion, plastid	68.56	68.82
TraesCS1B01G418900.1	Wheat	mitochondrion	67.8	68.58
TraesCS5B01G531800.1	Wheat	cytosol, peroxisome, plastid	65.53	67.84
TraesCS5A01G029700.1	Wheat	plastid	67.42	67.68
TraesCS1D01G398900.1	Wheat	peroxisome	45.83	67.6
TraesCS1D01G398800.1	Wheat	mitochondrion	66.67	67.43
TraesCS5D01G316400.1	Wheat	cytosol, peroxisome, plastid	66.67	67.43
TraesCS5D01G530100.1	Wheat	peroxisome	66.29	67.31
HORVU1Hr1G086200.3	Barley	peroxisome, plastid	68.18	67.16
TraesCS4D01G309300.1	Wheat	cytosol, peroxisome, plastid	66.67	66.92
TraesCS5B01G028300.1	Wheat	plastid	66.67	66.92
TraesCS5B01G310100.1	Wheat	peroxisome	65.91	66.67
TraesCS5D01G037500.1	Wheat	plastid	66.29	66.54
HORVU1Hr1G086190.1	Barley	peroxisome	48.86	66.49
EES10198	Sorghum	mitochondrion, plastid	68.18	66.42
TraesCS2D01G497300.1	Wheat	cytosol, peroxisome, plastid	65.91	66.16
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	65.91	66.16
TraesCS5B01G531600.1	Wheat	mitochondrion	65.15	66.15
TraesCS3B01G435100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	69.7	65.95
TraesCS5D01G545800.1	Wheat	cytosol, mitochondrion, plastid	65.91	65.91
TraesCS4A01G328000.1	Wheat	cytosol, peroxisome, plastid	65.15	65.4
TraesCS1A01G390800.1	Wheat	mitochondrion, plastid	68.94	65.0
TraesCS5B01G542200.1	Wheat	cytosol, peroxisome, plastid	64.39	64.64
TraesCS5D01G545700.1	Wheat	peroxisome	64.02	64.26
TraesCS4A01G343100.1	Wheat	cytosol, peroxisome, plastid	43.56	63.19
TraesCS2B01G525400.1	Wheat	endoplasmic reticulum, peroxisome, plastid	64.39	62.96
TraesCS1B01G410300.1	Wheat	peroxisome	71.97	62.09
HORVU3Hr1G090170.2	Barley	mitochondrion, plastid	71.21	61.24
TraesCS5B01G542100.1	Wheat	plastid	32.2	59.86
HORVU5Hr1G007770.4	Barley	peroxisome	61.36	58.48
HORVU5Hr1G122860.4	Barley	nucleus, peroxisome, plastid	62.12	58.36
HORVU0Hr1G027400.1	Barley	peroxisome	43.56	57.21
KXG34055	Sorghum	plastid	59.47	56.68
GSMUA_Achr9P03470_001	Banana	cytosol	56.06	55.02
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	65.91	54.04
OQU84126	Sorghum	peroxisome	57.2	53.17
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	52.65	53.05
GSMUA_Achr11P...	Banana	cytosol	53.79	52.99
GSMUA_Achr9P03440_001	Banana	cytosol	52.27	50.92
GSMUA_Achr9P03420_001	Banana	mitochondrion	54.92	48.17
EES08074	Sorghum	plastid	54.17	47.51
GSMUA_Achr5P04560_001	Banana	cytosol	57.58	44.06
OQU92858	Sorghum	cytosol, peroxisome, plastid	50.38	43.18
CDY35991	Canola	plastid	19.32	41.13
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	23.48	38.04
GSMUA_Achr6P34030_001	Banana	cytosol	50.38	36.74
OQU91956	Sorghum	extracellular, peroxisome	42.05	34.69
EES19901	Sorghum	peroxisome	32.95	34.39
EER98384	Sorghum	peroxisome	32.58	33.99
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	54.92	30.79
GSMUA_Achr10P...	Banana	cytosol	52.27	25.6
EES11417	Sorghum	peroxisome	28.79	25.59
EES11416	Sorghum	mitochondrion, peroxisome, plastid	28.79	25.59
OQU77380	Sorghum	mitochondrion	29.55	23.85

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	UniProt:A0A1B6PTN6	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG29038	ProteinID:KXG29038	ProteinID:KXG29038.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR42898
PANTHER:PTHR42898:SF1	InterPro:SDR_fam	SMART:SM00822	EnsemblPlantsGene:SORBI_3005G202700	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
UniParc:UPI00081AB55F	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:68786423..68795345

Molecular Weight (calculated)

27901.8 Da

IEP (calculated)

7.740

GRAVY (calculated)

0.170

Length

264 amino acids

Sequence
(BLAST)

001: MAASASRERW SLAGATALVT GGSKGIGHAI VEELAALGAR VHTCSRNAAE LEECRRRWAE DKGLQVTVSA CDVAVRADRE ALMDTVKDVF AGKLDILVNN
101: AAQVILKPAV ECTGEDYARI MATNLESSFH LSQLAHPLLR NATVAGGGSV VHISSMAGCL GVPGVVLYSI AKGGMNQLTR SLAVEWAQDK IRVNCVAPGM
201: VKTDMVIKNI ANSEAMEHRC QRIPLRRVGE PAEVASVVSF LCMPAASYVT GQVIYVDGGR TIGA

Best Arabidopsis Sequence Match ( AT2G29360.1 )
(BLAST)

001: MAKTGESLRD KPRWSLVGMT ALVTGGSKGI GEAVVEELAT LGARIHTCAR DETQLQESLR KWQAKGFQVT TSVCDVSSRD KREKLMETVS TIFEGKLNIL
101: VNNVGTCIVK PTLQHTAEDF SFTMATNLES AFHLSQLAHP LLKASGSGSI VLISSVSGVV HVNGASIYGV SKGAMNQLGR NLACEWASDN IRTNSVCPWF
201: IETPLVTESL SNEEFRKEVE SRPPMGRVGE VNEVSSLVAF LCLPAASYIT GQTICVDGGF TVNGFSFKPL P

Arabidopsis Description

SDRTropinone reductase homolog At2g29360 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.