Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G545700.1 | Wheat | peroxisome | 96.58 | 96.58 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 96.58 | 96.58 |
| TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 84.79 | 84.79 |
| HORVU0Hr1G027400.1 | Barley | peroxisome | 62.74 | 82.09 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 53.23 | 76.92 |
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 26.62 | 70.0 |
| TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 69.58 | 69.58 |
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 39.54 | 68.42 |
| EES10195 | Sorghum | mitochondrion | 66.92 | 66.67 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 66.16 | 66.16 |
| TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 80.99 | 66.15 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 65.02 | 66.02 |
| KXG29038 | Sorghum | mitochondrion, plastid | 65.4 | 65.15 |
| TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 68.82 | 64.64 |
| TraesCS5A01G029700.1 | Wheat | plastid | 64.64 | 64.64 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 59.32 | 64.46 |
| EES10198 | Sorghum | mitochondrion, plastid | 66.16 | 64.21 |
| Zm00001d007687_P001 | Maize | extracellular | 63.12 | 63.12 |
| TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 63.12 | 62.17 |
| Zm00001d048726_P001 | Maize | cytosol | 50.95 | 59.82 |
| GSMUA_Achr11P... | Banana | cytosol | 55.51 | 54.48 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 55.51 | 54.28 |
| TraesCS4A01G179900.1 | Wheat | peroxisome | 55.51 | 52.9 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 54.75 | 52.55 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 52.85 | 51.29 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 50.19 | 50.38 |
| TraesCS4A01G094400.1 | Wheat | plastid | 50.19 | 48.53 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 49.05 | 47.6 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 52.47 | 45.85 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 54.37 | 41.45 |
| CDY35991 | Canola | plastid | 19.39 | 41.13 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 23.19 | 37.42 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 50.57 | 36.74 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 32.7 | 33.99 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 55.51 | 31.0 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 28.9 | 25.42 |
| GSMUA_Achr10P... | Banana | cytosol | 51.71 | 25.23 |
| TraesCS1A01G083800.1 | Wheat | plastid | 29.28 | 22.19 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G328000.1 | EnsemblPlantsGene:TraesCS4A01G328000 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4A:+:614014654..614016256
Molecular Weight (calculated)
28293.9 Da
IEP (calculated)
6.706
GRAVY (calculated)
-0.003
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MAADCGSREE IWSLAGATAL VTGGSKGIGH AIVEELARFG ARVHTCSRNS AELEECRRRW EEKNLQVTVS VCDVSIGADR EKLMDTVRQT FHSKLDILVN
101: NAAQLFYKPT VGCTGEEYSN LMNTNLESTF HLSQLAHPLL LHASIAGGGT IINMSSIGGS IGFAGYTIYA TTKGAIHQLT RSLATEWGPD KIRVNAIAPG
201: FITTDMIKDI DTEFMKQEHL KTPLGRSGKP VEIATAVSFL CMPAASFITG QVICIDGGRT ISS
101: NAAQLFYKPT VGCTGEEYSN LMNTNLESTF HLSQLAHPLL LHASIAGGGT IINMSSIGGS IGFAGYTIYA TTKGAIHQLT RSLATEWGPD KIRVNAIAPG
201: FITTDMIKDI DTEFMKQEHL KTPLGRSGKP VEIATAVSFL CMPAASFITG QVICIDGGRT ISS
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.