Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G545800.1 | Wheat | cytosol, mitochondrion, plastid | 78.57 | 95.83 |
| TraesCS5B01G542100.1 | Wheat | plastid | 41.93 | 95.07 |
| TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 68.63 | 84.03 |
| HORVU5Hr1G122860.4 | Barley | nucleus, peroxisome, plastid | 71.12 | 81.49 |
| TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 66.15 | 80.99 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 44.41 | 78.57 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 57.45 | 71.43 |
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 21.74 | 70.0 |
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 32.92 | 69.74 |
| TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 56.52 | 69.2 |
| TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 59.32 | 68.21 |
| EES10195 | Sorghum | mitochondrion | 55.59 | 67.8 |
| EES10198 | Sorghum | mitochondrion, plastid | 56.52 | 67.16 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 54.66 | 66.92 |
| TraesCS5A01G029700.1 | Wheat | plastid | 54.66 | 66.92 |
| KXG29038 | Sorghum | mitochondrion, plastid | 54.04 | 65.91 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 49.07 | 65.29 |
| Zm00001d007687_P001 | Maize | extracellular | 52.8 | 64.64 |
| TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 52.8 | 63.67 |
| Zm00001d048726_P001 | Maize | cytosol | 40.06 | 57.59 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 48.76 | 57.3 |
| TraesCS4A01G179900.1 | Wheat | peroxisome | 46.58 | 54.35 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 44.72 | 53.53 |
| GSMUA_Achr11P... | Banana | cytosol | 43.79 | 52.61 |
| TraesCS4A01G094400.1 | Wheat | plastid | 43.48 | 51.47 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 42.55 | 50.55 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 41.93 | 49.82 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 40.06 | 49.24 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 41.93 | 44.85 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 45.03 | 42.03 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 18.63 | 36.81 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 40.99 | 36.46 |
| CDY35991 | Canola | plastid | 13.98 | 36.29 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 27.95 | 35.57 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 44.41 | 30.36 |
| GSMUA_Achr10P... | Banana | cytosol | 43.79 | 26.16 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 22.98 | 24.75 |
| TraesCS1A01G083800.1 | Wheat | plastid | 24.84 | 23.05 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G327900.1 | EnsemblPlantsGene:TraesCS4A01G327900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr4A:+:614004317..614006188
Molecular Weight (calculated)
34843.0 Da
IEP (calculated)
7.851
GRAVY (calculated)
0.012
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MVKINHYQTA RLTCCVLICG VPSCLGPAIK ETHIHVAQCQ VLPTTNRHFS HLSERQREMA VAGCGSREER WSLAGATALV TGGSKGIGHA IVEELAGFGA
101: RVHTCSRNAA ELEECRRLWE EKNLRVTVSV CDVLVRAQRE KLMETVRQTF DGKLDILVNN AGQFWFKPAD ECTAEDFSNL MTTNLEASFH LSQLARPLLI
201: HASIAGGGSI INMSSIGGSI AFVGSTIYAI TKGALNQLTR NLATEWAPNK IRVNGVAPGF VTTDMIKDVD SEYMKQENSK TLLGRSGKPV EIASAVSFLC
301: MPAASYITGQ VICIDGGRTI SS
101: RVHTCSRNAA ELEECRRLWE EKNLRVTVSV CDVLVRAQRE KLMETVRQTF DGKLDILVNN AGQFWFKPAD ECTAEDFSNL MTTNLEASFH LSQLARPLLI
201: HASIAGGGSI INMSSIGGSI AFVGSTIYAI TKGALNQLTR NLATEWAPNK IRVNGVAPGF VTTDMIKDVD SEYMKQENSK TLLGRSGKPV EIASAVSFLC
301: MPAASYITGQ VICIDGGRTI SS
001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG
Arabidopsis Description
Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.