CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
peroxisome 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G434900.1	Wheat	cytosol, mitochondrion, plastid	27.27	75.0
TraesCS1A01G383700.1	Wheat	cytosol, extracellular, plastid	45.87	73.03
Zm00001d007687_P001	Maize	extracellular	73.14	67.3
EES10195	Sorghum	mitochondrion	71.07	65.15
TraesCS3A01G401900.1	Wheat	extracellular, mitochondrion, plastid	70.25	64.64
TraesCS3D01G396800.1	Wheat	extracellular, mitochondrion, plastid	70.25	64.64
KXG29038	Sorghum	mitochondrion, plastid	69.83	64.02
TraesCS3A01G402000.1	Wheat	mitochondrion, plastid	67.77	62.36
HORVU1Hr1G084560.2	Barley	extracellular, mitochondrion, plastid	67.77	62.36
TraesCS5D01G530100.1	Wheat	peroxisome	66.94	62.31
TraesCS5D01G545800.1	Wheat	cytosol, mitochondrion, plastid	67.77	62.12
TraesCS3D01G396900.1	Wheat	mitochondrion, plastid	66.94	61.6
TraesCS2D01G497300.1	Wheat	cytosol, peroxisome, plastid	66.94	61.6
TraesCS5B01G028300.1	Wheat	plastid	66.53	61.22
TraesCS2A01G497100.1	Wheat	golgi, peroxisome, plastid	66.53	61.22
TraesCS5B01G531800.1	Wheat	cytosol, peroxisome, plastid	64.46	61.18
TraesCS5B01G531600.1	Wheat	mitochondrion	65.7	61.15
TraesCS1A01G390900.1	Wheat	mitochondrion, plastid	64.88	60.62
TraesCS1B01G418900.1	Wheat	mitochondrion	65.29	60.54
EES10198	Sorghum	mitochondrion, plastid	67.77	60.52
TraesCS5A01G029700.1	Wheat	plastid	65.7	60.46
TraesCS5B01G542200.1	Wheat	cytosol, peroxisome, plastid	65.29	60.08
TraesCS5D01G545700.1	Wheat	peroxisome	64.88	59.7
TraesCS4D01G309300.1	Wheat	cytosol, peroxisome, plastid	64.88	59.7
TraesCS5D01G037500.1	Wheat	plastid	64.88	59.7
TraesCS4A01G328000.1	Wheat	cytosol, peroxisome, plastid	64.46	59.32
TraesCS2B01G525400.1	Wheat	endoplasmic reticulum, peroxisome, plastid	66.12	59.26
TraesCS3B01G435100.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	68.18	59.14
TraesCS1D01G398800.1	Wheat	mitochondrion	63.64	59.0
TraesCS1B01G419000.1	Wheat	mitochondrion, plastid	44.21	58.79
TraesCS5B01G310100.1	Wheat	peroxisome	63.22	58.62
HORVU1Hr1G086200.3	Barley	peroxisome, plastid	64.46	58.21
TraesCS5D01G316400.1	Wheat	cytosol, peroxisome, plastid	62.4	57.85
EES10199	Sorghum	mitochondrion	63.22	57.52
TraesCS1D01G398900.1	Wheat	peroxisome	41.74	56.42
TraesCS1A01G390800.1	Wheat	mitochondrion, plastid	64.88	56.07
TraesCS4A01G343100.1	Wheat	cytosol, peroxisome, plastid	42.15	56.04
HORVU1Hr1G086190.1	Barley	peroxisome	44.21	55.15
HORVU3Hr1G090170.2	Barley	mitochondrion, plastid	69.83	55.05
TraesCS1B01G410300.1	Wheat	peroxisome	68.18	53.92
TraesCS5B01G542100.1	Wheat	plastid	31.41	53.52
HORVU5Hr1G122860.4	Barley	nucleus, peroxisome, plastid	61.98	53.38
HORVU5Hr1G007770.4	Barley	peroxisome	60.74	53.07
KXG34055	Sorghum	plastid	59.5	51.99
HORVU0Hr1G027400.1	Barley	peroxisome	42.98	51.74
TraesCS4A01G327900.1	Wheat	mitochondrion, plastid	65.29	49.07
OQU84126	Sorghum	peroxisome	56.2	47.89
GSMUA_Achr11P...	Banana	cytosol	52.07	47.01
GSMUA_Achr9P03470_001	Banana	cytosol	52.07	46.84
GSMUA_Achr9P03440_001	Banana	cytosol	49.17	43.91
GSMUA_Achr9P03430_001	Banana	cytosol, mitochondrion, plastid	47.11	43.51
GSMUA_Achr9P03420_001	Banana	mitochondrion	50.83	40.86
EES08074	Sorghum	plastid	48.76	39.2
CDY35991	Canola	plastid	19.83	38.71
Bra029705.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	25.21	37.42
GSMUA_Achr5P04560_001	Banana	cytosol	52.07	36.52
OQU92858	Sorghum	cytosol, peroxisome, plastid	45.45	35.71
GSMUA_Achr6P34030_001	Banana	cytosol	48.76	32.6
EES19901	Sorghum	peroxisome	30.99	29.64
OQU91956	Sorghum	extracellular, peroxisome	38.84	29.38
EER98384	Sorghum	peroxisome	30.58	29.25
GSMUA_Achr9P03450_001	Banana	cytosol, nucleus, peroxisome	51.65	26.54
EES11416	Sorghum	mitochondrion, peroxisome, plastid	32.23	26.26
EES11417	Sorghum	peroxisome	31.82	25.93
GSMUA_Achr10P...	Banana	cytosol	52.48	23.56
OQU77380	Sorghum	mitochondrion	30.58	22.63

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A1B6PTP8	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlants:KXG29040	ProteinID:KXG29040	ProteinID:KXG29040.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061
PANTHER:PTHR42898	PANTHER:PTHR42898:SF1	InterPro:SDR_fam	SMART:SM00822	EnsemblPlantsGene:SORBI_3005G203300	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00081AD4EF	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:68862557..68867174

Molecular Weight (calculated)

25288.7 Da

IEP (calculated)

8.134

GRAVY (calculated)

0.223

Length

242 amino acids

Sequence
(BLAST)

001: MAAGGSEIDK GKRWSLAGAT ALVTGGSKGI GHAIVEELAA FGVRVHTCSR SAADLEACRR RWSDKGLQVT VSACDLAVRA DRERLMETVK ATFDGKLDIL
101: VNNAAQLLAK PVAHSLAHPL LLNASSLAGI VNVSSIGSLL AYHGITLYGT AKAGMNQLTR SLAAEWASDK IRVNCVAPGL IMTDMAKEAP PEIIEQSLSS
201: VPMRRAGEPV EVASMVSFLC MPAASYVTGQ VICVDGGRTI SA

Best Arabidopsis Sequence Match ( AT1G07440.1 )
(BLAST)

001: MAGAEQSQRW SLKAKTVLVT GGTKGIGHAI VEEFAGFGAV IHTCARNEYE LNECLSKWQK KGFQVTGSVC DASLRPEREK LMQTVSSMFG GKLDILINNL
101: GAIRSKPTLD YTAEDFSFHI STNLESAYHL SQLAHPLLKA SGCGNIIFMS SIAGVVSASV GSIYSATKGA LNQLARNLAC EWASDGIRAN AVAPAVIATP
201: LAEAVYDDEF KKVVISRKPL GRFGEPEEVS SLVAFLCMPA ASYITGQTIC VDGGLTVNGF SYQPQG

Arabidopsis Description

Tropinone reductase homolog At1g07440 [Source:UniProtKB/Swiss-Prot;Acc:P0DKI3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.