Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 47.71 | 96.05 |
| HORVU1Hr1G084560.2 | Barley | extracellular, mitochondrion, plastid | 79.41 | 92.4 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 26.47 | 92.05 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 75.49 | 82.8 |
| TraesCS5B01G028300.1 | Wheat | plastid | 63.07 | 73.38 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 42.81 | 71.98 |
| KXG29038 | Sorghum | mitochondrion, plastid | 62.09 | 71.97 |
| EES10195 | Sorghum | mitochondrion | 61.11 | 70.83 |
| Zm00001d007687_P001 | Maize | extracellular | 58.82 | 68.44 |
| KXG29040 | Sorghum | cytosol, peroxisome, plastid | 53.92 | 68.18 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 57.84 | 67.82 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 57.52 | 66.92 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 55.56 | 66.67 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 55.88 | 65.52 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 55.56 | 65.38 |
| EES10198 | Sorghum | mitochondrion, plastid | 57.52 | 64.94 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 56.21 | 63.7 |
| Zm00001d048726_P001 | Maize | cytosol | 43.14 | 58.93 |
| TraesCS5B01G542100.1 | Wheat | plastid | 27.12 | 58.45 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 55.88 | 56.62 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 50.65 | 56.16 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 49.35 | 55.11 |
| GSMUA_Achr9P03470_001 | Banana | cytosol | 46.08 | 52.42 |
| GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 43.46 | 50.76 |
| GSMUA_Achr11P... | Banana | cytosol | 44.44 | 50.75 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 44.44 | 50.37 |
| TraesCS4B01G210000.1 | Wheat | plastid | 44.77 | 50.37 |
| GSMUA_Achr9P03440_001 | Banana | cytosol | 43.46 | 49.08 |
| GSMUA_Achr9P03420_001 | Banana | mitochondrion | 47.71 | 48.51 |
| GSMUA_Achr5P04560_001 | Banana | cytosol | 48.04 | 42.61 |
| CDY35991 | Canola | plastid | 16.67 | 41.13 |
| Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 21.24 | 39.88 |
| GSMUA_Achr6P34030_001 | Banana | cytosol | 42.48 | 35.91 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 27.78 | 33.6 |
| GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 46.08 | 29.94 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 24.18 | 24.75 |
| GSMUA_Achr10P... | Banana | cytosol | 43.46 | 24.68 |
| TraesCS1B01G101100.1 | Wheat | plastid | 25.82 | 22.7 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G410300.1 | EnsemblPlantsGene:TraesCS1B01G410300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | ncoils:Coil |
| PANTHER:PTHR42898 | PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| SEG:seg | SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:+:637368443..637370607
Molecular Weight (calculated)
33748.1 Da
IEP (calculated)
7.627
GRAVY (calculated)
-0.405
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLHNTKYH NTQRERERER ERERERERER ERERERERER EREMAASSMS RDERWSLAGA TALVTGGSKG IGHAIVEELA GHGARVHTCA RSAAELEECR
101: RRWEAKGLPV TVSVCDVSLR AHRLQLLETA KQVFDGKLDI LVNNAAQILA KASVEWTSEE YSHLMATNQE SYFHLSQLAH PFLLNATIAG GGSIVNISSH
201: AGSLGFPGLA LYSMAKGGIN QLTRSLATEW AQNKIRVNCV APSATKTDML NSLGPEIIEN ELARTPMRRA GEPAEVATVV SFLCMPAASF VTGQVITVDG
301: GRTISG
101: RRWEAKGLPV TVSVCDVSLR AHRLQLLETA KQVFDGKLDI LVNNAAQILA KASVEWTSEE YSHLMATNQE SYFHLSQLAH PFLLNATIAG GGSIVNISSH
201: AGSLGFPGLA LYSMAKGGIN QLTRSLATEW AQNKIRVNCV APSATKTDML NSLGPEIIEN ELARTPMRRA GEPAEVATVV SFLCMPAASF VTGQVITVDG
301: GRTISG
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.