Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G398800.1 | Wheat | mitochondrion | 93.49 | 93.49 |
TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 95.79 | 89.29 |
HORVU1Hr1G086190.1 | Barley | peroxisome | 65.13 | 87.63 |
TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 58.24 | 83.52 |
TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 26.05 | 77.27 |
TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 68.97 | 68.44 |
EES10195 | Sorghum | mitochondrion | 68.58 | 67.8 |
KXG29038 | Sorghum | mitochondrion, plastid | 68.58 | 67.8 |
TraesCS5B01G531600.1 | Wheat | mitochondrion | 67.43 | 67.69 |
TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 65.9 | 67.45 |
TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 69.35 | 67.04 |
TraesCS5B01G028300.1 | Wheat | plastid | 66.67 | 66.16 |
TraesCS5B01G310100.1 | Wheat | peroxisome | 65.52 | 65.52 |
KXG29040 | Sorghum | cytosol, peroxisome, plastid | 60.54 | 65.29 |
EES10198 | Sorghum | mitochondrion, plastid | 67.43 | 64.94 |
TraesCS5B01G542100.1 | Wheat | plastid | 35.25 | 64.79 |
Zm00001d007687_P001 | Maize | extracellular | 65.13 | 64.64 |
TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 66.67 | 62.37 |
TraesCS1B01G410300.1 | Wheat | peroxisome | 67.82 | 57.84 |
TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 66.28 | 57.28 |
Zm00001d048726_P001 | Maize | cytosol | 48.66 | 56.7 |
TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 59.0 | 56.2 |
GSMUA_Achr9P03470_001 | Banana | cytosol | 57.47 | 55.76 |
GSMUA_Achr11P... | Banana | cytosol | 56.7 | 55.22 |
TraesCS4B01G140000.1 | Wheat | peroxisome | 56.7 | 53.62 |
GSMUA_Achr9P03440_001 | Banana | cytosol | 55.56 | 53.51 |
GSMUA_Achr9P03430_001 | Banana | cytosol, mitochondrion, plastid | 53.26 | 53.05 |
TraesCS4B01G210000.1 | Wheat | plastid | 54.02 | 51.84 |
TraesCS4B01G209900.1 | Wheat | peroxisome | 51.34 | 49.63 |
GSMUA_Achr9P03420_001 | Banana | mitochondrion | 54.41 | 47.18 |
GSMUA_Achr5P04560_001 | Banana | cytosol | 58.24 | 44.06 |
CDY35991 | Canola | plastid | 20.69 | 43.55 |
Bra029705.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 24.14 | 38.65 |
GSMUA_Achr6P34030_001 | Banana | cytosol | 53.26 | 38.4 |
TraesCS5B01G161900.1 | Wheat | peroxisome | 31.42 | 32.41 |
GSMUA_Achr9P03450_001 | Banana | cytosol, nucleus, peroxisome | 57.09 | 31.63 |
GSMUA_Achr10P... | Banana | cytosol | 53.64 | 25.97 |
TraesCS2B01G441000.1 | Wheat | peroxisome | 27.59 | 24.08 |
TraesCS1B01G101100.1 | Wheat | plastid | 30.65 | 22.99 |
Protein Annotations
EnsemblPlants:TraesCS1B01G418900.1 | EnsemblPlantsGene:TraesCS1B01G418900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
PANTHER:PTHR42898:SF1 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:642526977..642529027
Molecular Weight (calculated)
28103.0 Da
IEP (calculated)
7.704
GRAVY (calculated)
0.056
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTGREKRWS LAGATALVTG GSKGIGRAIV EELAGFGARV HTCSRNAAEL EECRRQWEEE KLAVTVSVCD VSVRAAREKL METVKESFDG KLDILVNNAG
101: QLFFKVATEL TENNYSHLME TNLASSFHLS QLAHPLLLNA STCGGGSIVN ISSIAGLVGF PCFTLYSITK GGMNQLTRSL ATEWARDNIR VNGVAPSMIM
201: TGMIKDVRIG SEALEKEYSR IPMGRTGKPV EVASVVSFLC MPTASYITGQ VICIDGGRSI C
101: QLFFKVATEL TENNYSHLME TNLASSFHLS QLAHPLLLNA STCGGGSIVN ISSIAGLVGF PCFTLYSITK GGMNQLTRSL ATEWARDNIR VNGVAPSMIM
201: TGMIKDVRIG SEALEKEYSR IPMGRTGKPV EVASVVSFLC MPTASYITGQ VICIDGGRSI C
001: MAKAGENSRD KSRWSLEGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR DETQLQERLR EWQAKGFEVT TSVCDVSSRE QREKLMETVS SVFQGKLNIL
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
101: VNNAGTGIIK PSTEYTAEDY SFLMATNLES AFHLSQIAHP LLKASGSGSI VFMSSVAGLV HTGASIYGAS KGAMNQLGRS LACEWASDNI RVNSVCPWVI
201: TTPLTSFIFS DEKLRKAVED KTPMGRVGEA NEVSSLVAFL CFPAASYITG QTICVDGGAS VNGFSFKP
Arabidopsis Description
Tropinone reductase homolog At2g29150 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW03]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.