Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 95.56 | 95.2 |
| TraesCS4D01G210700.1 | Wheat | plastid | 97.41 | 82.97 |
| TraesCS4B01G210000.1 | Wheat | plastid | 78.15 | 77.57 |
| HORVU4Hr1G060330.1 | Barley | mitochondrion | 88.52 | 74.69 |
| GSMUA_Achr10P... | Banana | cytosol | 71.48 | 71.22 |
| Os03t0269100-02 | Rice | mitochondrion, plastid | 80.37 | 70.45 |
| AT5G06060.1 | Thale cress | peroxisome | 67.04 | 68.56 |
| VIT_13s0019g02180.t01 | Wine grape | peroxisome, plasma membrane, plastid | 67.78 | 68.28 |
| CDY14094 | Canola | peroxisome | 66.3 | 68.06 |
| Solyc03g096640.2.1 | Tomato | mitochondrion, plastid | 67.04 | 67.54 |
| PGSC0003DMT400043159 | Potato | mitochondrion | 67.04 | 67.29 |
| CDY04977 | Canola | peroxisome | 65.19 | 66.92 |
| Bra028744.1-P | Field mustard | cytosol | 64.44 | 66.16 |
| CDX98899 | Canola | peroxisome | 63.7 | 65.65 |
| EES08074 | Sorghum | plastid | 71.48 | 64.12 |
| CDX70101 | Canola | peroxisome | 61.11 | 62.98 |
| Bra009159.1-P | Field mustard | cytosol, mitochondrion, peroxisome, plasma membrane | 60.74 | 62.6 |
| CDY04975 | Canola | mitochondrion | 25.93 | 62.5 |
| KRH31007 | Soybean | mitochondrion | 61.85 | 61.62 |
| VIT_13s0019g02130.t01 | Wine grape | peroxisome | 61.11 | 61.57 |
| VIT_13s0019g02140.t01 | Wine grape | peroxisome | 61.48 | 61.25 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 19.63 | 60.23 |
| KRG97856 | Soybean | mitochondrion, plastid | 60.37 | 59.93 |
| KRH31025 | Soybean | plastid | 60.74 | 59.21 |
| KRH31026 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 59.26 | 58.82 |
| KRG97870 | Soybean | mitochondrion | 54.07 | 58.4 |
| PGSC0003DMT400043152 | Potato | peroxisome | 59.26 | 57.76 |
| Solyc03g096660.1.1 | Tomato | extracellular | 41.11 | 56.92 |
| VIT_13s0019g02170.t01 | Wine grape | mitochondrion, nucleus, peroxisome, plastid | 59.26 | 56.14 |
| KRG97857 | Soybean | mitochondrion | 51.11 | 55.2 |
| TraesCS5B01G028300.1 | Wheat | plastid | 53.33 | 54.75 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 36.3 | 53.85 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 51.48 | 53.26 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 51.11 | 53.08 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 50.0 | 52.94 |
| KRH31021 | Soybean | mitochondrion | 59.26 | 52.81 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 49.63 | 51.34 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 51.85 | 51.09 |
| CDX98898 | Canola | cytosol, peroxisome, plasma membrane | 56.67 | 49.35 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 47.78 | 49.05 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 48.89 | 48.89 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 50.0 | 48.39 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 49.26 | 48.19 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 52.96 | 47.35 |
| TraesCS5B01G542100.1 | Wheat | plastid | 24.07 | 45.77 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 50.37 | 44.44 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 31.48 | 33.6 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 24.81 | 22.41 |
| TraesCS1B01G101100.1 | Wheat | plastid | 27.41 | 21.26 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G209900.1 | EnsemblPlantsGene:TraesCS4B01G209900 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR42898 |
| PANTHER:PTHR42898:SF14 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SMART:SM00822 | SUPFAM:SSF51735 | TMHMM:TMhelix | MapMan:50.1.1 | : | : |
Description
No Description!
Coordinates
chr4B:+:448309269..448313414
Molecular Weight (calculated)
29204.8 Da
IEP (calculated)
6.362
GRAVY (calculated)
-0.080
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAADDIGAS AGRWSLHGRT ALVTGGTRGI GRAVVEELAA LGAAVHTCSR KEAELGERLK EWEAKGFRVT GSVCDVSVRD QRELLLRDVA DRFAGKLDIL
101: INNVGRNHRK PTTEYSADEY SFIMATNLES AYHLCQLAHP LLKASGVASI VFISSVSGVV AISSGSIYGM TKRAMNQLAK NLACEWAKDN VRINSVAPWY
201: IKTSLVEEDL ANEDFVDSIA RRTPMRRVGE PEEVSSLVAF LCMPGSSYIT GQTISVDGGM TINGMYPTEN
101: INNVGRNHRK PTTEYSADEY SFIMATNLES AYHLCQLAHP LLKASGVASI VFISSVSGVV AISSGSIYGM TKRAMNQLAK NLACEWAKDN VRINSVAPWY
201: IKTSLVEEDL ANEDFVDSIA RRTPMRRVGE PEEVSSLVAF LCMPGSSYIT GQTISVDGGM TINGMYPTEN
001: METDKRWSLA GKTALVTGGT RGIGRAVVEE LAKFGAKVHT CSRNQEELNA CLNDWKANGL VVSGSVCDAS VRDQREKLIQ EASSAFSGKL NILINNVGTN
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
101: VRKPTVEYSS EEYAKIMSTN LESAFHLSQI AHPLLKASGV GSIVFISSVA GLVHLSSGSI YGATKGALNQ LTRNLACEWA SDNIRTNCVA PWYIKTSLVE
201: TLLEKKEFVE AVVSRTPLGR VGEPEEVSSL VAFLCLPASS YITGQVISVD GGFTVNGFSY AMKP
Arabidopsis Description
Tropinone reductase homolog At5g06060 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHT0]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.