Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 5
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G083800.1 | Wheat | plastid | 97.13 | 97.41 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 96.84 | 97.12 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 96.26 | 83.96 |
| OQU77380 | Sorghum | mitochondrion | 69.54 | 74.01 |
| KRG92837 | Soybean | endoplasmic reticulum, nucleus | 60.63 | 72.01 |
| KRH33956 | Soybean | endoplasmic reticulum | 59.77 | 70.99 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 60.63 | 70.81 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 58.05 | 70.38 |
| Bra021324.1-P | Field mustard | cytosol | 58.33 | 70.24 |
| AT3G05260.1 | Thale cress | cytosol | 58.05 | 69.9 |
| CDY43488 | Canola | cytosol | 58.05 | 69.9 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 58.33 | 69.28 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 57.47 | 69.2 |
| Zm00001d006796_P001 | Maize | extracellular | 69.54 | 67.6 |
| Os05t0140800-01 | Rice | plastid | 70.11 | 66.85 |
| KRH68573 | Soybean | cytosol | 51.44 | 65.09 |
| KRH68615 | Soybean | cytosol, nucleus, plastid | 41.09 | 64.71 |
| KRH68572 | Soybean | cytosol | 55.75 | 64.67 |
| KRG96884 | Soybean | cytosol | 54.6 | 64.41 |
| VIT_14s0128g00340.t01 | Wine grape | plastid | 61.78 | 63.05 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 52.87 | 63.01 |
| AT1G54870.2 | Thale cress | plastid | 60.63 | 62.61 |
| Solyc01g098850.2.1 | Tomato | extracellular | 59.48 | 60.88 |
| CDY05152 | Canola | cytosol | 38.22 | 55.65 |
| TraesCS5B01G542100.1 | Wheat | plastid | 14.08 | 34.51 |
| TraesCS3B01G484300.1 | Wheat | peroxisome, plastid | 24.43 | 31.02 |
| TraesCS1B01G418900.1 | Wheat | mitochondrion | 22.99 | 30.65 |
| TraesCS4B01G210000.1 | Wheat | plastid | 23.85 | 30.51 |
| TraesCS5B01G531600.1 | Wheat | mitochondrion | 22.13 | 29.62 |
| TraesCS5B01G310100.1 | Wheat | peroxisome | 21.84 | 29.12 |
| TraesCS5B01G531800.1 | Wheat | cytosol, peroxisome, plastid | 21.26 | 29.02 |
| TraesCS5B01G542200.1 | Wheat | cytosol, peroxisome, plastid | 21.84 | 28.9 |
| TraesCS5B01G028300.1 | Wheat | plastid | 21.84 | 28.9 |
| TraesCS2B01G525400.1 | Wheat | endoplasmic reticulum, peroxisome, plastid | 22.41 | 28.89 |
| TraesCS5B01G161900.1 | Wheat | peroxisome | 20.98 | 28.85 |
| TraesCS1B01G419000.1 | Wheat | mitochondrion, plastid | 14.66 | 28.02 |
| TraesCS4B01G209900.1 | Wheat | peroxisome | 21.26 | 27.41 |
| TraesCS3B01G435100.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 21.55 | 26.88 |
| TraesCS2B01G386600.1 | Wheat | mitochondrion, plastid | 22.7 | 26.16 |
| TraesCS1B01G410300.1 | Wheat | peroxisome | 22.7 | 25.82 |
| TraesCS4B01G140000.1 | Wheat | peroxisome | 20.11 | 25.36 |
| TraesCS2B01G441000.1 | Wheat | peroxisome | 21.55 | 25.08 |
| TraesCS3B01G434900.1 | Wheat | cytosol, mitochondrion, plastid | 6.32 | 25.0 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G101100.1 | EnsemblPlantsGene:TraesCS1B01G101100 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43348 |
| PANTHER:PTHR43348:SF4 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TIGR:cd05355 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1B:-:111025341..111026765
Molecular Weight (calculated)
37748.2 Da
IEP (calculated)
9.339
GRAVY (calculated)
-0.296
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALLATPTR AQPFLLLLHR LRPNQLHPLR TARGLASFAA SSPRAPPTRR GTRAMASQQK FPPQQQDCQP GKEHAMDPRP ETLIKNYKSA NKLQGKVALV
101: TGGDSGIGRA VCLCFALEGA TVNFTYVKGH EDKDAEETLQ ALRDIKSRTG AGEPKALAGD LGYEENCRRV VEEVANAHGG RVDILVNNAA EQYVRPCITE
201: ISEQDLERVF RTNIFSYFLM AKFAVKHMGP GSSIINTTSV NAYKGNATLL DYTATKGAIV AFTRALSMQL AEKEIRVNGV APGPIWTPLI PASFPEEKVK
301: QFGSEVPMKR AGQPSEVAPS FVFLASEQDS SYISGQILHP NGGTIVNS
101: TGGDSGIGRA VCLCFALEGA TVNFTYVKGH EDKDAEETLQ ALRDIKSRTG AGEPKALAGD LGYEENCRRV VEEVANAHGG RVDILVNNAA EQYVRPCITE
201: ISEQDLERVF RTNIFSYFLM AKFAVKHMGP GSSIINTTSV NAYKGNATLL DYTATKGAIV AFTRALSMQL AEKEIRVNGV APGPIWTPLI PASFPEEKVK
301: QFGSEVPMKR AGQPSEVAPS FVFLASEQDS SYISGQILHP NGGTIVNS
001: MAMNVLCRVF TSSRVLSSNV TFSFSQIPNN TKKPLLEKRR LSPRVCLRAM ASEKQKQHAQ PGKEHVMESS PQFSSSDYQP SNKLRGKVAL ITGGDSGIGR
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
101: AVGYCFASEG ATVAFTYVKG QEEKDAQETL QMLKEVKTSD SKEPIAIPTD LGFDENCKRV VDEVVNAFGR IDVLINNAAE QYESSTIEEI DEPRLERVFR
201: TNIFSYFFLT RHALKHMKEG SSIINTTSVN AYKGNASLLD YTATKGAIVA FTRGLALQLA EKGIRVNGVA PGPIWTPLIP ASFNEEKIKN FGSEVPMKRA
301: GQPIEVAPSY VFLACNHCSS YFTGQVLHPN GGAVVNA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.