Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22160430
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G101100.1 | Wheat | plastid | 97.41 | 97.13 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 97.12 | 97.12 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 97.69 | 84.96 |
| OQU77380 | Sorghum | mitochondrion | 69.74 | 74.01 |
| KRG92837 | Soybean | endoplasmic reticulum, nucleus | 61.38 | 72.7 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 61.67 | 71.81 |
| KRH33956 | Soybean | endoplasmic reticulum | 60.52 | 71.67 |
| CDY17559 | Canola | cytoskeleton, nucleus, peroxisome | 58.79 | 71.08 |
| Bra021324.1-P | Field mustard | cytosol | 59.08 | 70.93 |
| CDY43488 | Canola | cytosol | 58.79 | 70.59 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 59.08 | 69.97 |
| AT3G05260.1 | Thale cress | cytosol | 58.21 | 69.9 |
| Zm00001d006796_P001 | Maize | extracellular | 71.47 | 69.27 |
| CDY27781 | Canola | cytosol, peroxisome, plastid | 57.64 | 69.2 |
| Os05t0140800-01 | Rice | plastid | 71.76 | 68.22 |
| KRH68573 | Soybean | cytosol | 52.16 | 65.82 |
| KRH68572 | Soybean | cytosol | 56.48 | 65.33 |
| KRH68615 | Soybean | cytosol, nucleus, plastid | 41.5 | 65.16 |
| KRG96884 | Soybean | cytosol | 54.76 | 64.41 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 53.89 | 64.04 |
| VIT_14s0128g00340.t01 | Wine grape | plastid | 62.25 | 63.34 |
| AT1G54870.2 | Thale cress | plastid | 61.38 | 63.2 |
| Solyc01g098850.2.1 | Tomato | extracellular | 59.94 | 61.18 |
| CDY05152 | Canola | cytosol | 38.33 | 55.65 |
| TraesCS4A01G343100.1 | Wheat | cytosol, peroxisome, plastid | 17.29 | 32.97 |
| TraesCS1A01G390900.1 | Wheat | mitochondrion, plastid | 24.21 | 32.43 |
| TraesCS2A01G497100.1 | Wheat | golgi, peroxisome, plastid | 23.34 | 30.8 |
| TraesCS4A01G094400.1 | Wheat | plastid | 23.92 | 30.51 |
| TraesCS2A01G369400.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 23.34 | 30.34 |
| TraesCS5A01G164400.1 | Wheat | peroxisome | 21.9 | 30.04 |
| TraesCS3A01G401900.1 | Wheat | extracellular, mitochondrion, plastid | 22.77 | 30.04 |
| TraesCS5A01G029700.1 | Wheat | plastid | 22.77 | 30.04 |
| TraesCS4A01G342900.1 | Wheat | cytosol, peroxisome, plastid | 8.65 | 30.0 |
| TraesCS3A01G448300.1 | Wheat | peroxisome, plastid | 23.63 | 29.93 |
| TraesCS1A01G390800.1 | Wheat | mitochondrion, plastid | 23.92 | 29.64 |
| TraesCS4A01G328000.1 | Wheat | cytosol, peroxisome, plastid | 22.19 | 29.28 |
| TraesCS3A01G402000.1 | Wheat | mitochondrion, plastid | 21.9 | 28.9 |
| TraesCS4A01G094500.1 | Wheat | cytosol, peroxisome, plastid | 21.61 | 27.68 |
| TraesCS1A01G383700.1 | Wheat | cytosol, extracellular, plastid | 12.1 | 27.63 |
| TraesCS4A01G179900.1 | Wheat | peroxisome | 21.9 | 27.54 |
| TraesCS4A01G327900.1 | Wheat | mitochondrion, plastid | 23.05 | 24.84 |
| TraesCS2A01G422500.1 | Wheat | golgi, peroxisome | 21.33 | 24.75 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G083800.1 | EnsemblPlantsGene:TraesCS1A01G083800 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43348 |
| PANTHER:PTHR43348:SF4 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TIGR:cd05355 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:68373865..68375317
Molecular Weight (calculated)
37661.2 Da
IEP (calculated)
9.664
GRAVY (calculated)
-0.288
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MSALLATPTR AQPFLLLLHR LRPNQLRPLP ATRALASFAA SSPRAPPTRR GTRAMASQKF PPQQQDCQPG KEHAMDPRPE TLIKNYKSAN KLQGKVALVT
101: GGDSGIGRAV CLCFALEGAT VNFTYVKGHE DKDAEETLQA LRDIKSRTGA GEPKALPGDL GYEENCRRVV EEVANAHGGR VDILVNNAAE QYVRPCITEI
201: TEQDLERVFR TNIFSYFLMA KFAVKHMRPG SSIINTTSVN AYKGNATLLD YTATKGAIVA FTRALSMQLA EKGIRVNGVA PGPIWTPLIP ASFPEEKVKQ
301: FGSEVPMKRA GQPSEVAPSF VFLASEQDSS YISGQILHPN GGTIVNS
101: GGDSGIGRAV CLCFALEGAT VNFTYVKGHE DKDAEETLQA LRDIKSRTGA GEPKALPGDL GYEENCRRVV EEVANAHGGR VDILVNNAAE QYVRPCITEI
201: TEQDLERVFR TNIFSYFLMA KFAVKHMRPG SSIINTTSVN AYKGNATLLD YTATKGAIVA FTRALSMQLA EKGIRVNGVA PGPIWTPLIP ASFPEEKVKQ
301: FGSEVPMKRA GQPSEVAPSF VFLASEQDSS YISGQILHPN GGTIVNS
001: MNVLCRVFTS SRVLSSNVTF SFSQIPNNTK KPLLEKRRLS PRVCLRAMAS EKQKQHAQPG KEHVMESSPQ FSSSDYQPSN KLRGKVALIT GGDSGIGRAV
101: GYCFASEGAT VAFTYVKGQE EKDAQETLQM LKEVKTSDSK EPIAIPTDLG FDENCKRVVD EVVNAFGRID VLINNAAEQY ESSTIEEIDE PRLERVFRTN
201: IFSYFFLTRH ALKHMKEGSS IINTTSVNAY KGNASLLDYT ATKGAIVAFT RGLALQLAEK GIRVNGVAPG PIWTPLIPAS FNEEKIKNFG SEVPMKRAGQ
301: PIEVAPSYVF LACNHCSSYF TGQVLHPNGG AVVNA
101: GYCFASEGAT VAFTYVKGQE EKDAQETLQM LKEVKTSDSK EPIAIPTDLG FDENCKRVVD EVVNAFGRID VLINNAAEQY ESSTIEEIDE PRLERVFRTN
201: IFSYFFLTRH ALKHMKEGSS IINTTSVNAY KGNASLLDYT ATKGAIVAFT RGLALQLAEK GIRVNGVAPG PIWTPLIPAS FNEEKIKNFG SEVPMKRAGQ
301: PIEVAPSYVF LACNHCSSYF TGQVLHPNGG AVVNA
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT1G54870]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.