Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27781 | Canola | cytosol, peroxisome, plastid | 90.31 | 90.31 |
| PGSC0003DMT400073652 | Potato | cytosol, peroxisome, plastid | 75.09 | 74.06 |
| CDY05152 | Canola | cytosol | 59.52 | 71.97 |
| KRG96884 | Soybean | cytosol | 68.51 | 67.12 |
| AT1G54870.2 | Thale cress | plastid | 78.2 | 67.06 |
| KRH68573 | Soybean | cytosol | 63.32 | 66.55 |
| KRH68572 | Soybean | cytosol | 68.86 | 66.33 |
| Solyc01g098850.2.1 | Tomato | extracellular | 74.05 | 62.94 |
| GSMUA_Achr4P24690_001 | Banana | cytosol | 64.71 | 62.75 |
| VIT_14s0128g00340.t01 | Wine grape | plastid | 71.28 | 60.41 |
| OQU77380 | Sorghum | mitochondrion | 67.82 | 59.94 |
| GSMUA_Achr4P29030_001 | Banana | cytosol | 58.82 | 58.22 |
| TraesCS1A01G083800.1 | Wheat | plastid | 69.9 | 58.21 |
| TraesCS1B01G101100.1 | Wheat | plastid | 69.9 | 58.05 |
| TraesCS1D01G084900.1 | Wheat | mitochondrion, plastid | 69.2 | 57.64 |
| Zm00001d006796_P001 | Maize | extracellular | 66.09 | 53.35 |
| Os05t0140800-01 | Rice | plastid | 66.09 | 52.33 |
| HORVU1Hr1G018140.5 | Barley | extracellular, mitochondrion | 69.9 | 50.63 |
| AT2G29150.1 | Thale cress | peroxisome | 28.72 | 30.97 |
| AT2G29350.1 | Thale cress | plastid | 28.37 | 30.48 |
| AT4G05530.1 | Thale cress | peroxisome | 26.3 | 29.92 |
| AT2G29290.2 | Thale cress | plastid | 26.99 | 29.77 |
| AT5G06060.1 | Thale cress | peroxisome | 26.3 | 28.79 |
| AT2G29360.1 | Thale cress | cytosol | 26.99 | 28.78 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 25.95 | 28.63 |
| AT1G07440.1 | Thale cress | mitochondrion | 25.95 | 28.2 |
| AT2G29170.1 | Thale cress | cytosol | 10.38 | 28.04 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 24.91 | 27.48 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 24.57 | 27.31 |
| AT2G29370.1 | Thale cress | peroxisome | 25.26 | 27.24 |
| AT3G12800.1 | Thale cress | peroxisome | 28.03 | 27.18 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 23.88 | 26.54 |
| AT2G29320.1 | Thale cress | mitochondrion | 23.88 | 25.65 |
| AT2G07640.1 | Thale cress | mitochondrion | 13.49 | 25.0 |
| AT2G29300.2 | Thale cress | extracellular | 24.57 | 24.83 |
| AT2G29260.1 | Thale cress | plastid | 26.3 | 23.6 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 23.88 | 22.48 |
| AT1G36580.1 | Thale cress | nucleus | 11.42 | 16.92 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:819690 | ProteinID:AAF27032.1 | ProteinID:AEE74212.1 | EMBL:AF428435 |
| ArrayExpress:AT3G05260 | EnsemblPlantsGene:AT3G05260 | RefSeq:AT3G05260 | TAIR:AT3G05260 | RefSeq:AT3G05260-TAIR-G | EnsemblPlants:AT3G05260.1 |
| TAIR:AT3G05260.1 | Unigene:At.18382 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_187177.1 | PFAM:PF13561 | PO:PO:0009010 |
| PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR43348 | PANTHER:PTHR43348:SF4 | UniProt:Q9MA93 |
| InterPro:SDR_fam | SMART:SM00822 | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000486AB | : |
Description
Glucose and ribitol dehydrogenase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9MA93]
Coordinates
chr3:-:1497483..1499096
Molecular Weight (calculated)
31453.6 Da
IEP (calculated)
6.509
GRAVY (calculated)
-0.137
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGFPPQKQ ETQPGIQHVM EPTPEFSSSN YKPSNKLHGK VALVTGGDSG IGKAVCHCYA LEGASVAFTY VKGREDKDAE ETLRLLHEVK TREAKEPIMI
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
101: ATDLGFEENC KRVVEEVVNS FGRIDVLVNC AAEQHEVSIE DIDEARLERV FRTNIFSQFF LVKYALKHMK EGSSIINTTS VVAYAGNSSL LEYTATKGAI
201: VSFTRGLALQ LAPKGIRVNG VAPGPVWTPL IPASFSEEAI KQFGSETPMK RAAQPVEVAP SYVFLACNHC SSYYTGQILH PNGGLIVNA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.