Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72061 | Canola | cytosol | 77.57 | 76.15 |
| VIT_06s0004g05440.t01 | Wine grape | cytosol | 51.4 | 67.07 |
| Solyc03g096650.1.1 | Tomato | cytosol | 52.34 | 62.92 |
| VIT_06s0004g05400.t01 | Wine grape | cytosol | 56.07 | 54.05 |
| VIT_06s0004g05310.t01 | Wine grape | cytosol | 55.14 | 52.21 |
| GSMUA_Achr5P04570_001 | Banana | cytosol | 53.27 | 44.88 |
| KRH29740 | Soybean | cytosol | 33.64 | 36.73 |
| AT2G29150.1 | Thale cress | peroxisome | 86.92 | 34.7 |
| AT2G29370.1 | Thale cress | peroxisome | 82.24 | 32.84 |
| AT2G29360.1 | Thale cress | cytosol | 80.37 | 31.73 |
| AT2G29350.1 | Thale cress | plastid | 78.5 | 31.23 |
| AT2G29290.2 | Thale cress | plastid | 70.09 | 28.63 |
| VIT_06s0004g05360.t01 | Wine grape | cytosol, mitochondrion, plastid | 62.62 | 27.92 |
| VIT_06s0004g05380.t01 | Wine grape | plastid | 65.42 | 25.93 |
| VIT_06s0004g05370.t01 | Wine grape | peroxisome | 58.88 | 25.0 |
| VIT_06s0004g05430.t01 | Wine grape | mitochondrion, nucleus, peroxisome | 62.62 | 24.81 |
| KRH24731 | Soybean | nucleus | 61.68 | 24.72 |
| VIT_06s0004g05320.t01 | Wine grape | endoplasmic reticulum, peroxisome, plastid | 57.94 | 24.6 |
| KRH24733 | Soybean | nucleus | 60.75 | 24.53 |
| AT1G07450.1 | Thale cress | cytosol, nucleus, peroxisome | 58.88 | 24.23 |
| KRH24732 | Soybean | cytosol, endoplasmic reticulum, plastid | 58.88 | 23.42 |
| AT1G07440.1 | Thale cress | mitochondrion | 57.01 | 22.93 |
| AT2G30670.1 | Thale cress | cytosol, nucleus, peroxisome | 55.14 | 22.52 |
| AT2G29310.1 | Thale cress | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 55.14 | 22.52 |
| AT5G06060.1 | Thale cress | peroxisome | 55.14 | 22.35 |
| AT2G29320.1 | Thale cress | mitochondrion | 55.14 | 21.93 |
| AT2G29330.1 | Thale cress | cytosol, peroxisome, plastid | 53.27 | 21.92 |
| AT2G29300.2 | Thale cress | extracellular | 57.94 | 21.68 |
| VIT_06s0004g05390.t01 | Wine grape | cytosol, plasma membrane, plastid | 49.53 | 21.54 |
| VIT_06s0004g05330.t01 | Wine grape | peroxisome | 49.53 | 20.87 |
| AT2G29260.1 | Thale cress | plastid | 59.81 | 19.88 |
| AT2G29340.1 | Thale cress | cytosol, endoplasmic reticulum, peroxisome | 57.01 | 19.87 |
| AT4G05530.1 | Thale cress | peroxisome | 29.91 | 12.6 |
| AT1G36580.1 | Thale cress | nucleus | 20.56 | 11.28 |
| AT3G05260.1 | Thale cress | cytosol | 28.04 | 10.38 |
| AT3G12800.1 | Thale cress | peroxisome | 24.3 | 8.72 |
| AT1G54870.2 | Thale cress | plastid | 25.23 | 8.01 |
| VIT_06s0004g05450.t01 | Wine grape | plasma membrane | 5.61 | 3.33 |
| AT2G07640.1 | Thale cress | mitochondrion | 0.93 | 0.64 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | ArrayExpress:AT2G29170 | EnsemblPlantsGene:AT2G29170 | RefSeq:AT2G29170 | TAIR:AT2G29170 |
| RefSeq:AT2G29170-TAIR-G | EnsemblPlants:AT2G29170.1 | TAIR:AT2G29170.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PO:PO:0000293 |
| PRINTS:PR00081 | PANTHER:PTHR42898 | PANTHER:PTHR42898:SF7 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI000034EDC1 |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G29170]
Coordinates
chr2:-:12541650..12542465
Molecular Weight (calculated)
11760.2 Da
IEP (calculated)
7.090
GRAVY (calculated)
-0.162
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKAEENLRD KCRWSLGGMT ALVTGGSKGL GEAVVEELAM LGARVHTCAR NETQLQECVR EWQAKGFEVT TSVCDVSSRD QREKLMENVA SIFQGKLNIL
101: VSLCIRA
101: VSLCIRA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.