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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:
  • cytosol 2
  • peroxisome 1
  • mitochondrion 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06260 Canola plastid 85.0 84.35
Bra031575.1-P Field mustard plastid 85.0 84.35
CDY09917 Canola cytosol 84.62 83.97
AT2G29310.1 Thale cress cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole 73.08 72.52
AT2G29330.1 Thale cress cytosol, peroxisome, plastid 70.0 70.0
AT2G30670.1 Thale cress cytosol, nucleus, peroxisome 68.46 67.94
AT2G29320.1 Thale cress mitochondrion 69.23 66.91
VIT_06s0004g05400.t01 Wine grape cytosol 28.46 66.67
VIT_06s0004g05310.t01 Wine grape cytosol 28.46 65.49
AT2G29360.1 Thale cress cytosol 68.08 65.31
AT2G29290.2 Thale cress plastid 65.77 65.27
AT1G07440.1 Thale cress mitochondrion 66.54 65.04
AT2G29350.1 Thale cress plastid 66.54 64.31
AT2G29150.1 Thale cress peroxisome 66.15 64.18
VIT_06s0004g05320.t01 Wine grape endoplasmic reticulum, peroxisome, plastid 61.92 63.89
VIT_06s0004g05370.t01 Wine grape peroxisome 61.92 63.89
AT2G29370.1 Thale cress peroxisome 65.77 63.81
VIT_06s0004g05440.t01 Wine grape cytosol 20.0 63.41
Solyc03g096650.1.1 Tomato cytosol 21.54 62.92
VIT_06s0004g05380.t01 Wine grape plastid 65.0 62.59
AT5G06060.1 Thale cress peroxisome 63.46 62.5
AT2G29300.2 Thale cress extracellular 68.08 61.89
VIT_06s0004g05430.t01 Wine grape mitochondrion, nucleus, peroxisome 64.23 61.85
KRH24731 Soybean nucleus 61.92 60.3
VIT_06s0004g05330.t01 Wine grape peroxisome 58.46 59.84
AT2G29170.1 Thale cress cytosol 24.23 58.88
KRH24733 Soybean nucleus 59.62 58.49
AT2G29340.1 Thale cress cytosol, endoplasmic reticulum, peroxisome 68.08 57.65
KRH24732 Soybean cytosol, endoplasmic reticulum, plastid 59.62 57.62
VIT_06s0004g05360.t01 Wine grape cytosol, mitochondrion, plastid 53.08 57.5
VIT_06s0004g05390.t01 Wine grape cytosol, plasma membrane, plastid 50.77 53.66
KRH29740 Soybean cytosol 19.62 52.04
VIT_06s0004g05450.t01 Wine grape plasma membrane 35.77 51.67
GSMUA_Achr5P04570_001 Banana cytosol 23.08 47.24
AT2G29260.1 Thale cress plastid 58.46 47.2
AT4G05530.1 Thale cress peroxisome 29.62 30.32
AT3G05260.1 Thale cress cytosol 26.54 23.88
AT2G07640.1 Thale cress mitochondrion 13.46 22.44
AT3G12800.1 Thale cress peroxisome 24.62 21.48
AT1G54870.2 Thale cress plastid 27.31 21.07
AT1G36580.1 Thale cress nucleus 14.62 19.49
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1EntrezGene:837257ProteinID:AAF79553.1ProteinID:AEE28127.1ArrayExpress:AT1G07450
EnsemblPlantsGene:AT1G07450RefSeq:AT1G07450TAIR:AT1G07450RefSeq:AT1G07450-TAIR-GEnsemblPlants:AT1G07450.1TAIR:AT1G07450.1
EMBL:AY090925Unigene:At.42300GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfRefSeq:NP_172225.1PFAM:PF13561PO:PO:0000013
PO:PO:0000037PO:PO:0000230PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0001185PO:PO:0004507PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007611
PO:PO:0007616PO:PO:0008019PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020137PO:PO:0025022PO:PO:0025281
PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061PANTHER:PTHR42898PANTHER:PTHR42898:SF7UniProt:Q8RX32
InterPro:SDR_famSUPFAM:SSF51735InterPro:Sc_DH/Rdtase_CSUniParc:UPI00000481F1SEG:seg:
Description
Tropinone reductase homolog At1g07450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX32]
Coordinates
chr1:-:2287926..2289336
Molecular Weight (calculated)
27897.4 Da
IEP (calculated)
5.036
GRAVY (calculated)
0.212
Length
260 amino acids
Sequence
(BLAST)
001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.